| Id Trinity | TRINITY_DN52595_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_507084 |
| Sequence | AAATTAACCAGTTTAATACGGTCACACCGATCAAACCTGTTATTATTATTATTAAGTAATTTGTGAATGTTAGGAATTAAAATTTCCTAATACTGCAAAA CTCGATTAGTATTATTCTCCGCCCCCTTCATATTGCAGCGGCGCAGTTACATAACGGACGTTTTCTCTTGACGTGAGAAGCCGTTACTGGTTTTTGTTAC CTTTGCGGACTTCACTCTCTTAGGTACGAATTCAGAACAAGAGTCACATTATCTGAGAATAACACATAACAGAGAAGTTGGAAGAAGAATATTGATGCTG ATTTGAGGAGTGGAATTGGGATAAGATAATCATTTGAAGATTCTGTTGGAAACCTAGGGTTTCACAGAGAGAAAATATGGATGGAGAACATGTTAGGATT GGGGCGAAGAAGAAGAAGAGATCGAAGCCGGTGGAAATTGGTTTTGATTCGGATGATAATGAGACCATTGGCTCTATGTTTAAGCTAAGGAGGCCTAAGA AGAAGGTTAATTTGGCATTGGAGGGGTCTTGTGGCGATGGAGGCAAGAATGGTAAGGCTGTTGTTAGGAAAGATTCAGTTGCTGATAACAAGGATTTGGG GGGTATGGATGATACCTTGGCTAGTTTCAGGAAGAGGTTGAAGGGTCCAAAGAGAGATCGCGGATCTGAAGCCAGTGGACGAAGAAGTTCTGCTTCAAAC GTGGGTCTGGTGTCATATTCTGATGGATCTTTGAATGTTTCTGTTGAGGGAATTGCGGATCATGGTCTGTCTGGTGATGATTTCATTGCTCAGGAATCAA GGGGCACCTCAAAGGATGAGAAAGTCGTAGATTTGTTGCTTGACGATGGTACACAGCACCCTTCTGATGAGAAAATGGAAGACTCCTTGTCAGTGATTAT CCGAAAGGCGCAATCTAATCTGATTAAGAAATCGCGGGCCTCTTCAAGTTCAAAGAAGAAAAGGGGGAGTCAGAATGATAATGATTTGAGACCTGGCTCT GAAAGTGTTCCTGAAACTGTAGATTCTATGGGTGAATGTAAATCTAGATCTGCTCCTGCCTCGGAATCAGGTAAAAGAGATCTAACATTTGCTGGTGCTG TGTCTCAACCATCTGCTCCGGGTGAATTTTCTTCCATTTCTGATAAACAAAAGTACAGTGATGATTGTTTTCAAGAGGATGCTGCTGAGGGTATTTGTGA TATTCCAGATGAATCATTAGCTGGTCACTCTCCCTCAACTAATGTCTGCAAAGGAGATAGGCAACAATTGTCTTGTGTGCAATCTGAAAATGTTTGTTTA AATCCGTGTTCTTCCAGGTTAGTTGATGTTGAAATGATTCGTACTATGCCTCTATCAAGAACAGGGGAAGGGACACATGAATGTACTGAGAGTGAGTTCA AGAATAGATCGACTGATGAACTAGCACAAGTGTGTAATGATTCTTCAAAACACGGTGTTTCTGCTTCTATGGAGAAAGAAAGTTCCTTACCTTCTCATGA CACTGGATCCTTGATTAAATCAAGTGGAAGTATATTGATTGAGAATAATTTAACGGTTTCTGGAAACTTTTTCCAGGAATCCTCAGACAATGAAGCTCTA AAGCTCTCTGGATTCCATGTGGAGGAAGATGGAGGTGTAAAATCTGAAACCGAGTTTATATCTGGTAGAAGCTTCTTTGATTGTAGTAGCTCAGATACAA AGGCTGAAGTGAAAGATTTTGCTTTAGGTTCTTCACTTGAAAAAAATGATGTAATAGCTGGTGGTAGCTTATCTCCTATGATGTCTAATGAAGCCAGTGA ATCTGAATTGGCTAATGAGTCAAATCACCCAGACAAACCTTCAGAAATGTGTAATATTCCAAAAGACTCTACTCCTTCAGTTTTTGAATGCTTAGATCCA GTTCAATCCGATGGATCCTCTCTTCCATCTGCAATTCCAGATGAAAATGAGAATTATGCGGAATTTCATGCCTCTCTGTCTGATTTTGCCAACAATGATG GTAAGATCTCAGTCCTTTCACGTGCCGTGCGAAAGGCCAAAATGCATAAGCATGGAGACATGACTTATGAGGGGGATACTGATTGGGAGATTTTAATAAA TGATCAATCTCTTCATGAAAGCCAAGTTTTTGCAGATGGTGACCACACTCTTAGAACAAGGGCGAAGCTTGATTCCTCTTTTAATGTTGTCTATGACTCT GAAAGTGTTGCAGTAGCAGCAGTATCAGCTGGATTGAAAGCCCATGCAGCTAGTCCAATTGAGAAAATAAAATTTAAGGAGATCTTGAAGCGTAAAGGTG GTCTCAGGGAATACTTGGATTGCAGAAATAAGATCTTAAGTCTTTGGAGCAGAGATGTTACACGGATTTTGCCTCTTGCTGAATGTGGTGTTAGTGGTAT CCATTCTGGCGATGAAAGTCCCCGTTCGTTTCTCACTAGGGAAGTCTATGCATTTCTGGATCAATGTGGTTACATAAATGTTGGGATTGCCTCTCAGAAG GAGATTCTTGGAAATAGTGCAAGTGAATGCTGTAAACTTGTAGAAGAAAAAGGTCTTGAGGAAAGTTCCACAGCTTTGGTGGCTGACTCTGAAGATGGAG TTTCCTTTATTGTTGGCCAGACTGAAATGTCAGATACTTCCATGGAGATTAACAAAAGTCTAACACCAGTGTATTACGAAGACCTGAAAACTGAAGCTGC AGAAGACAGAAGGCATGTTAATGCAGCAACAATGGCTATATCAAATATGAGACAACATGAAGAAAGAAAAAATTATGAATGCCTGGAAAACGGGCAAAGC AATGAATCCACCTGCATTAAATCTGCCGTAGGTGATCAGATAGGTGATCCTCTGCAGTTTGATTCAAAGGCTAGAAAGAGAGTGATTATCATTGGAGCTG GTCCTGCTGGGCTAACTGCTGCTCGTCATTTGAAACGTCAGGGATTTCCCGTAATTGTACTTGAGGCTAGGAGTAGGATAGGGGGTCGTGTATTTACAGA CCACTCATCTCTTTCTGTCCCAGTGGATCTTGGTGCTAGCATTATCACTGGTGTGGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCATTG GTTTGTGCTCAATTGGGCCTTGAGTTGACAGTGCTAAACAGTGACTGTCCTCTTTATGATACAGTTACAGGACAAAAGGTTCCGGCAGATATGGATGAAG CACTTGAAGCTGAATACAATAGTCTTCTTGATGACATGGAATTGCTCGTTGCTCAGAAAGGTGAACAGGCGATGAGAATGTCTCTTGAAGATGGTTTAGA ATATGCCCTTAAGATTCGCCGTATGGCACGCTCTGGAAGTATTGGAGAAACTGAAAAACATAATTCTGATTATAGACCATTTGATTCCAAAAGAGGCTGT CCTGTGAAAAAAAATATTGATGAGGAGATTTTGAGTCCTCTGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGTTGTGCTGCTTTGC TTACAGAAGTTTCTCTTCCCTATTGGAATCAAGATGATGTGTATGGAGGATTTGGGGGAGCTCATTGTATGATTAAAGGGGGTTACAGCACTGTTGTTGA GTCTTTAGGAGAAGGGCTTGCTGTCCACTTGAACCATGTCGTAACAAATGTGTCTTATGGCATCACAGAATCTGGCCAGAATAATAAAGTCAAAGTTTCT ACGTCAAATGGGAACGACTTCTTTGGAGATGCTGTCCTCATCACTGTTCCACTAGGCTGTTTGAAGGCTGAAACTATACAATTCTCCCCTCCCTTGCCGC CATGGAAATATTCTTCTGTTCAGCGTCTTGGCTTTGGAGTTCTCAATAAAGTGATCTTGGAATTTCCTTGCGTGTTTTGGGATGATGCTGTGGATTACTT TGGAGCGACAGCTGAGGAAAGAGGCAAAAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTTGGGGCTCCTGTCCTTATAGCATTAGTGGTT GGTAAGGCAGCCATAGATGGTCAGAGTTTGAGCTCTACTGATCATGTCAACCATGCATTGAAAGTTCTACGTAAACTTTTTGGGGAGGCTTCAGTACCTG ATCCTGTTGGACATGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCTTATGTTGCTATTGGAGCATCAGGAGAAGACTATGATAT ATTAGGGAGACCAGTTGATAATCGCTTGTTTTTTGCTGGTGAAGCGACCTGCAAAGAGCATCCTGATACAGTCGGTGGTGCAATGATGAGTGGACTACGG GAGGCCGTTCGCATAATTGACATATTGAGCACGGGAAATGATTACACTGCAGAAGTGGAGGCAATGGAAGCTGCCTTGAGACAGTCAGATACCGAAAATG AAGTTAGGGATATAACAAAGAGACTCAACACAATAGAGCTTTCTAACCTGTTCTACAAGAACTCTTTGGATGATGCTCAAATATTAACCCGGGAAGCTTT ACTAAGAGAAATGTTCCTTAATGCGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAAGAATTGCTATGCCTTCCTGTTGGAAACTTGAAGTCGTTTGCT GGGAGTAAAGAAGGGCTAGCTGTTCTCAACTCATGGATACTGGACTCAATGGGGAAGGATGGTACCCAACTCTTGCGGCACTGTGTGCGTCTTCTTGTGC GTGTTTCAACTGATCTACTTGCTGTACGCTTGTCAGGGATAGGGAAAACAGTGAAGGAAAAAGTTTGCGTTCATACCAGCCGCGACATTCGTGCTATAGC AAGCCAGTTGGTAAATATATGGCTTGAAGTATTCCGCAAGGAGAAAAAAGCATCTAATGGGGGATTGAAGTTGACAAGACAAGCAACTGCTGTAGATTTA CTGAAGAGAAAATATTTAAAAGATTCAGCCTCAGGAAAGCCACCCCTGAGTACACATCATGGTAGTTTTGAGAATAAAGGAACACAACAAGCAACAAGGC ATGAGGCCATTTCTTCCAGGTCCCAAGGTTCAATTGGCAAAGTACTCACTGAGAAGGAGGATAACTGCTATGTTATTTCTGAAGAAGAACGGGCTGCTAT CGCTGCTGCAGAAGCTGCCCGTGCTAAAGCTCATGCTGCTGCTGAGGCATATGCTGCTGCAGAAGCCAGGCGCAATAAGTTGTTACAGCTTCCTAAGATA CCCTCATTCCAGAAATTTGCTTCAAAAAATGATGAATGTGATAGCAGAAAAAAGTGGTCTGGTGCTTTGGGAAGGCAAGATTGTATTTCAGAGATTGATT CGAGGAATTGTAGAGTTAGGGACTGGTCTGTTGATTTTTCTGCTGCTTGTGTTAACCTTGACAATTGTAGAATGCCAGTTGATAACCTTTCACAGAGAAG TCACTCAAATGAGATTGCCAGCCATTTGAGTTTCAGAGAGCACTCGGGAGAAAGTGTCGCTGTGGACAGCAGTATATATACAAAAGCTTGGATTGACACA GATAATGGTGTGGGAATAAAAGATTCTGATGCCATAGACAGATGGCAATCTCAAGCAGCTGCAGCCGATTCTTATTTTTCTAATCCAAGCATAAGTTTGA AGGATGAGGAGGATTCAAATGGGTGTTCAAGGTTACCCAGCTGGAAGCATGATGGTATGGCAAATGAGAGCTCAATTTCACAGGTTACTGTAAATAAGGA AGCCTTGAAAAGTCATCACTCCCGTGGAGCAGATCATATTAAACAGGCTGTAGTGGATTATGTTGGATCACTACTTATGCCCCTTTATAAAGCAAGGAAA CTAGACAAGGATGGCTACAAGGCTATAATGAAGAAAAGTGCAACAAAGGTCATTGAGAAAGCCACAGATAAAGAAAAGGCCATGACTGTTGATGAGTTTC TAGATTTTAAGCGAAAGACTAAGATTCGCTCCTTTGTGGACACATTGATTGAGAGACACATGGCAATAAAACCAGATATGAAATCCTAATGTTACTGGTT GGGAATAACCTGTACTTTTTGGACTTCTGTGTAATAGTTGCTTAAATCTGGTACTTCAGTTCTCACAGTTTTTGTGGCCATTGACATTTTTGCTGATGAG CACCTCAATCTACCAATGTAAATTATTCAGAAGGTGCCATTAAAGAAACAGATAAAACCTGATCAATCCAAATTGAATGGGCTCTATGTTAATTCTTCCT CCAGGCAACCTTGAACAGAATACTAAAACATTAATGGTGGATTACCAGTGAACAGGCCTTACTACTTTTATAAACAGATCCAATGCAAATGTCAGTTGGA TCTTCCGTGGTACTGGCATCAGCAGGTTCGAAGATAACAGCAGATTGTAGTCATCCATGGTTTAAAACTTTATCTTCTGCCGAGGTTTATATCTGTGGGT GGAAACTTTAGACCCTGTTTTGATTAAAGGGGTTTCTAACGGACAATACATCATTTTGACTTTATGAATTTGTACAGCTTAGGATTATTTAGTGATGACA ACCATGCATTGACATTTCCCATGGCCTAGTAGCATCATTTATGTTTAACATCAAATAGTAACTTCAATTTCATCCTCCCAAGTGGAAAAATAACTATGCC ACCAGTTTCATCTCTTTCTGTCTATTTCTCTGTGTACCTTGTCTATCTATAGTGTAGTCAGCTTCCACGTGTGTTCCAAAAGAAATTAACTACAAACATG GTATCCTTACCAAACTAGCCCTTCATTTAGCAACAGTTATGATTCAAAGGATTGCGCCATGCGATGCCGACGTCTTTTGAATTGTGTTGACCAAATGTCA GTGTTCCGTCTTGGCTGTTCTGTTGTGCTAATTATTTGCTTACACATCTCTCTATTGGTTGCTAGGCTGAGGAAGATTATGTCATTCACAGATGGGAGGT AATAGACTATCTTCCTGCCACAGTATGCATAATTAAAATCCAATATCTAGAAGGGGTGATTCCTGAGTACATTCTTGTCATCAATTCGGTTCCCTTGGTT TGCAACAATGGCGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_194005; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507084
| Blastp | Lysine-specific histone demethylase 1 homolog 3 from Arabidopsis with 57.93% of identity |
|---|---|
| Blastx | Lysine-specific histone demethylase 1 homolog 3 from Arabidopsis with 57.85% of identity |
| Eggnog | amine oxidase(ENOG410XSNC) |
| Kegg | Link to kegg annotations (AT4G16310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436862.1) |
| Pfam | SWIRM domain (PF04433.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |