| Id Trinity | TRINITY_DN52608_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_463889 |
| Sequence | AAAAAATACATGCGACCCACGAATAGGTACTAGTAGGTATTCCTCGTCGATACTATTACTAAGAAATGTATTGCACTCTTCCAAATTCCAAAGGTTAATA GTGTTCTAAAATCTGAGCTTGAAAATATGAAATCATTTGAACCGTGGGTGTCATAACTCATAACATTGAGTCATAAAACATCGAGTCATAGAACATTACA CACATATTCAGATCTACACTCTTCTTTCTTTCCTTTCGATTCCTCCATTTCATTTCTCAGATCTCTCTTACTTTTCCCACCTTCCATTCTCTCATCTCTC TTCAATTTCGCATGATCTGAATTCATCTACATTTTCCTCGATTTCCGATTCCGATTTCACGAGTAATTGATTGCGATTTAGAGTGAGAACAAAATGGCTG GAGGCGCAGCCGGTGGTTTTCTGACTCGATCGTTCGATTCTATGCTCAAGGAATGTTCTGGAAAGAAGTATCCTGAGCTTCAGAAAGCTATTCAGAATTA CACAGAGATTACTAAAGAAGCTAGCCAGAGAAAGCAAGCTGTTTCAAGTGAGGCGAATCAAGCAGCGCCCTCAGCCGAATCTGCTAGCACAAAAGAAACT CAAGATGGAGCGGCTACTACAACAGAAGCAGGTCAGTCACAGAAGGCTGAGCATGTTTCTGATGCAGCAGATCATGGCTCTAGCAAGCCTAAAAGTGGAA ATATTACCCTTGTCTTAGCTAGCGCGGGAAATACACTTGATGGAGCTGATGCTGAACTTGTTTTAAATCCACTTCGAATTGCATTTGAGACGAAGAACTT GAAAATCCTAGAAGCTGCTTTAGACTGTCTTCATAAACTCATTGCATATGACCATTTGGAGGGAGATCCCGGGTTAGATGGTGGTAAAAATGTCCCATTG TTTACAGATATTCTAAACATGGTTTGTGGTTGTATTGACAATTCATCACCCGACAGTACTGTTCTCCAAGTGCTGAAGGTACTTCTTACTGCTGTGGCTT CCTCAAAATTCAGAGTTCATGGCGAACCTTTGCTTGGAGTTATTAGAGTATGCTACAATATTGCTCTGAATAGCAAGAGTCCTATAAACCAAGCAACATC AAAGGCGATGCTGACACAGATGATAAGCATCACTTTCAGGAGAATGGAGACTGATCTGGTTGAAACTTCATCTGGTTCTGGTGGACATGCAATTACAAAG GCAGCTTCACAAGAGAACTTAAACACAAAATCTGATGAAATTTCCATGGGAGACTCAAATGAGAAAGAAACGACTTTAGGTGATGCACTCAGCCAAGCCA AGGATACATCTCCAACATCTCTTGAGGAACTTCAAAATCTTGCTGGGGGTGCTGATATCAAGGGCTTAGAAGCTGTACTGGACAAGGCTGTGCACACTGA GGATGGTAAAAAGATAACACGTGGGATTGATTTGGAGAGCATGGGTATAGTTCAACGTGATGCTTTGTTGATATTCCGCACTCTTTGCAAGATGGGTATG AAAGAAGATAATGATGAAGTTACAACCAAGACAAGGATATTATCACTTGAGCTTCTGCAGGGTCTTTTGGAGGGAGTTAGCCACTCATTTACAAAGAACT TCCATTTTATTGATTCAGTGAAGGCATATCTTTCATATGTATTGTTGCGAGCTTCAGTTTCACAATCTCCTGTTATATTTCAGTATGCAACTGGAATATT CCTGGTACTGTTATTGCGATTCAGGGAGACTCTCAAAGGTGAAATAGGCATCTTCTTTCCGTTGATTGTTCTTAGACCACTGGATGGTTTAGATTTTCCT GTCAACCAAAAGCTTAGTGTTCTTCGGATGCTAGAGAAAATCTGTAAAGACCCACAGATGCTTGTTGACATCTTCGTGAATTATGACTGTGATCTTGAGG CGCCAAACTTGTTTGAACGAATGGTTACAACTCTATCCAAAATTGCTCAAGGGACTCAAAGTAATGATCCAAATTCAGTTGCTGTTTCTCAAACTGCCTC CGTTAAAGGTTCATCACTTCAAGGTCTTGTGAGTGTACTTAAATCACTGGTTGATTGGGAGCATTCACATCGAGAATCAGAAAGGTTAAAGAATAACCTA CAAGAAGGGGTTTCAGCTGAAGATTCTTCTGAAATAAGACCCAAGGAAGATGTTAGCAATGATTTCGAGAAGGCTAAGGCCCATAAATCCACATTACAGG CTGCCATTGCTGAGTTCAACAGGAAACCAATGAAAGGGGTGGAATATCTAATATCAAATAAGCTGGTGGACAACACACCTGCTTCTGTTGCTCAGTTTTT TAAAAACACTCCCAATTTGGATAAGGCTACAATTGGTGACTATTTAGGTCAACATGAAGACTTTCCCCTTGCTGTGATGCATGCTTATGTAGATTCTATG AAATTTTCTGGTATGAAATTTGATACTGCTATCCGGGAGTTTCTTAAAGGGTTCCGACTTCCTGGGGAAGCTCAAAAGATAGATCGAATCATGGAAAAGT TTGCAGAGAGATACTGTGCAGACAACCCGGACCTATTTAAAAATGCAGATACAGCATATGTTCTTGCTTATGCTGTTATCATGCTAAATACTGATGCTCA TAACCCAATGGTGTGGCCTAAGATGTCCAAGTCAGATTTTGTTCGCATGAATGCCAGGGATGAAGCGGACGAATGTGCTCCTAGGGAACTGCTAGAAGAG ATCTATGATTCCATTGTCAAAGAAGAGATTAAAATGAAAGATGACGCATCTTTAATTGGGAAAGGTAGCAAACAGAAGTCTGAAGGTGAAGAAGGACGCC TTGTCAGTATTCTTAACCTGGCACTCCCCAAAAGGAAGTCATCAGCAGATGCCAAGAGTGAAAGTGAGGCCATCATTAGGAAAACACAAGCTATATTCAG GAGTCAAGGTGTGAAAAGAGGAGTTTTCTACACTGCTCAGCAGATTGAACTTGTAAGGCCCATGGTAGAAGCTGTTGGGTGGCCTTTGCTTGCTACTTTC TCTGTAACTATGGAGGAAGGTGAGAATAAGCCTCGCGTTGTTCTGTTGATGGAGGGCTTTAAAGCTGGCATACATATTACATATGTGCTTGGAATGGATA CCATGCGCTATGCTTTTTTAACATCTCTGGTCAGGTTTACTTTCTTGCATGCCCCCAAGGAAATGCGCAGTAAGAATGTCGAAGCTTTGCGTACACTGTT GGTTCTTTGTGACTCAGACGTTAACTCTCTTCAAGACACATGGAATGCAATTCTGGAATGTGTTTCTCGCCTTGATTTTATAACAACTACTCCTGCAATT TCTGCAACCGTCATGTATGGATCAAACCAAATCTCCAGGGATGCCGTTGTTCAATCTCTGAGAGAGTTAGCTGGAAAACCTGCTGAACAAGTTTTCACGA ATAGTGTCAAACTACCTAGTGATTCAGTTGTGGAATTCTTCACTGCTCTCTGTGGTGTATCAGCTGAAGAGCTAAAACAAACTCCAGCTCGTGTTTTCAG CTTGCAAAAGCTTGTTGAAATTAGTTATTACAATATGGCTCGTATACGTATGGTCTGGGCTAGAATCTGGTCTGTTTTAGCAAACCATTTTATATCAGCT GGTAGTCATCATGATGAGAAAATTGCTATGTATGCCATAGATTCTCTAAGACAACTTGGTATGAAGTATTTGGAGCGTGCTGAATTGGCCAATTTCACTT TCCAAAATGATATCCTCAAACCATTTGTTGTTCTTATGCGTAATAGTCAAAGTGAATCCAAAAGGAGGCTAATTGTTGATTGCATTGTTCAGGTTTAGTG GTGTAAAGTTCCGATTTTTTTTCCATTTGTGATTAATGTCATTGGATATTTTAACTAAAATTCCGGTTAATGCAGATGATAAAATCTAAGGTCGGAAACA TAAAGTCTGGGTGGCATAGTGTATTTATGATTTTTACAGCTGCTGCAGATGATGAATTGGAGACAATTGTTGAGAGTGCATTTGAAAATGTTGAGCAGGT CATCTTAGAACACTTTGATCAAGTAGTCGGAGACTGTTTCATGGATTGCGTGAATTGTCTGATCAGGTTTGCCAACAATAAAAGTTCACATCGTATTAGT TTGAAGGCTATTGCACTCCTGCGAATCTGTGAGGACCGTCTTGCAGAGGGTCTTATTCCTGGAGGTGCTTTAATGCCTATTGATGCCGATTTGGATGCAA CTTTGGATGTAACTGAGCATTATTGGTTCCCAATGCTGGCTGGTTTATCTGATCTAACATCAGACCAGAGACCTGAGGTCAGAAGTTGTGCACTTGAGGT CTTGTTTGATTTACTGAATGAAAGAGGTAGCAAGTTCTCTAGATCATTTTGGGAGAATATTTTTCATCGAGTTCTATTCCCAATTTTTGATCATGTGAGA CATGCTGGAAAGGAGGGCTTTAGTTCTACTGATGATGATTGGTTTCGTGAAACAAGCATACATTCACTTCAGCTGCTATGTGACCTTTTCAACACATTCT ATAAGGTAAAGAACTAAAACATTATTGTTTTCTATTCTTGCGACTTTTCTGATTGGCCTTATACGTAGACTAAAGCATTAGATGCATCAATGAGGGCTTG TTAATCTTGATACTAAATTTTAGCAATGCTACTCAGCATATAGCAGCTGCCAAGGATAACATGTTACCTTGCACAAAACTCAAGTATTGACTTCAAGATT GAAATACAAGTCTTGAAAGCAATATTTGCTTCTGGATTTTGGTGCTTTCTTCAGATCAATATAACAAGGGGATGCATGGAGTGCTCTATGAAATTTCCAA TTTTATTACAATGAATTAAGTTATTCCATTTAATGCAGTATTTTTTTTCTTTTGGAAGATTTGGATTTATCTAACACGTTTAGAGCTGATTTGGATTTGT CCAACAAGATTTCCATCCATTGTTTTCTTTTGTTGTTGAAAATTAATAAACAGGAAATGGATGTAAAATAATTGCTGTAAGACTTTTTACTTTTTGAAAC TTTTATATTTAGGGTTATTGACGTGGGAATATCTCTAACTTACTATTTGATGTACATGCCATTTGAATGCCGTCTTACTTAAAAGGGTAAATTTATTTGG ATGATGTCTTGTTTGAAAATCTGTGCATGGACTCTTAGTTTCTTGGATTAGATGCATGTGACAGCTTTAATCAAACTATATGGAATTTGAGGTATTCAGT ATTTAAATTTTGTGAGTTATCTAATTATTATTAAATTTAAAAAGATTATTCATGAGGAATCTTTCTTCCAGGATGTTTGTTTCATGCTGCCACCACTACT TGGTTTGCTGTTAGATTGTGCCAAAAAGACAGATCAAACAGTGGTCTCAATTTCTCTTGGTGCCTTGGCGCATCTTGTAGAAGTTGGTGGACATCAATTT AGTGACAATGACTGGGACACGTTGCTTAAAAGCATAAGAGATGCTTCATACACTACCCAACCTCTAGAGCTGCTTAATGCTTTGAGTTTTGAAAATCTGA GAAACCATGGAGGCGTTATTCGAGATTCTGAGGCCAATGCAGGTGACAGTGGTACCAGTAAGTCGATTGACAATGAGGTAGTGAGTGGCCATCAACTTGA TGTCAATGATAATGGAAAATTATCCACACGGGCATCCTCAAATACAAATGCTGATGGAGTTGAAGATTCAGTATTGCAGATGAATTTAGATCCGTCTGAA GCCCTTCCATCTCCATCAGCACAGTCTCCCAAACCTACAGATGGAGTAGGCCTCCAACGGAATCAAACATTTGGTCAACGATTTATGGACAATATCTTCC GTAGAAATCTTACTTTAAAACCTGAAAGCCGTGTATCAGATGCTTCTCAACCATCTTCTCCGGTTCAGGTTGCTGATGTGGTAGAGCCATATACCAAGAA TGAGGAGAGTCCTTTGCTTGTAGTTGTCCGAGGAAAGTGCATTACACAATTATTGCTGCTTAGTGCAATTGATGGTATTCAGGTTTGTATGTTAATTTCT TCTTTGTGTAGATCTCATATTCTGAGGTTCACCAAGATTTAGTGTAGGTAGGTAAGATGATCAGTTTTTAAGATTTTTGCATTTGAAAATGAGAACTTTT TTCTCAGCTTTGCTGCAACTTATTTGTTTCCTCAGAGCTTGTTTGGGATAATGGGCGAATTAAGAAGGCTGTCCCCGTCCTCCAATCTAATTCGCCAATT ATTTGCATGCTCAGAGTCTGTTTGGGATAATGGGGAGCTGAGGAGGCTCCCCCCTTTTTCCTTCCAATAAAAGGCCATAGAATACCTTCAATGTGAGGAC CTGCTTCTTCGCTCTGCATGTGGGGAAATGATTGGAAGTGTAATTTGAAACCTACCAGTTTAAATATACTTGATGGTGGATGGATGGTGAGGGACTGAGG GAAAAGTTTTAGAATCCATCTCCTAACCGTAGCATAAAAAATAGTATTATTGATGTGAGTTTAATGGTTAGAAGAAATTTTGAGCTTTGGCCTGGTTGCA ATGGTCAGTGTCAGTAATGGGGAGTGAGAGATTTGATATCTTATCCCAATTAAGTTTTTCTAATTATTTGCAGAAGAAATATTGGACCAAGTTAAAATCA CCACAAAAGATTGCTATAATGGATATTTTGCTGTCTTTGTTGGAGTTTGCTGCTTCATACAACTCATCCACCAACCTCAGAACTCGAATGCATCAAATTC CTGATGAAAGGCCACCAGTAAATCTTCTTCGTCAGGAATTAACTGGTACTGTGATATATCTGGACATCTTACAGAAAGCAACTTGTGGGTTAGAAACAAA CAAAGAGCCTGATGGATCTCAAGATACCAATTCTATAGCAGATAATGGCTCTAGTATTATTCAACATTCTGACACGGAAGAGAAATTTGAAAGGATAGCT GAGGAAAAACTGGTCTCATTCTGTGAACAGGTTCTCAGGGAGGCATCTGATCTCCAGTCAACAACCGGAGAAACCACTAACATGGATATCCACCGTGTCT TGGAAATGCGTGCTCCAATCATTGTTAAGGTGTTACAAAGCATGTCTTTTATGAACAATAAGATTTTCAGAAGACACCTAAGAGAATTCTATCCTTTGCT AACGAAACTAGTTTGCTGTGACCAGATGGATGTTCGTGGAGCTCTTGGTGATCTATTCCAAGCACAATTGAAAGCTCTTTTACCATAGTTATCTTATAAT ACTGCTATTAGGATTCTCGGACATAAATTAATTCTCACTGCATTGCCAATATCAATTTTGGCTCGCCTGGAAATAAGATATATATTATAGTCTTTTACTA TTTGACCATTTTATGAAATTTTGTGCTTGCGCCAACTCTTGTTGAAAGGCAATAGAAATGTAATTTTGGTTCTCAATGTTCCTCTGCACTTATCTCCATT TTTTTTGTCCACTTTTCTAATGGTAGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_194121; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_463889
| Blastp | Brefeldin A-inhibited guanine nucleotide-exchange protein 5 from Arabidopsis with 75.97% of identity |
|---|---|
| Blastx | Brefeldin A-inhibited guanine nucleotide-exchange protein 5 from Arabidopsis with 75.81% of identity |
| Eggnog | and Sec7 domain(COG5307) |
| Kegg | Link to kegg annotations (AT3G43300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455497.1) |
| Pfam | Dimerisation and cyclophilin-binding domain of Mon2 (PF16213.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |