Ll_transcript_463793

• Id Trinity: TRINITY_DN52626_c6_g1_i10
• Name Transcript: Ll_transcript_463793
• Sequence: GAAAAGCTTAAGACACGGATTTTTATCCTGGTTCGTTTGCGGGTCCACTTGCAAACTACATCCAGGCCTCCCTTCTGATTTGGGAGATTTTCTTCACTAA TTGATAAAGTGTCTTACAAACACACTTCCAATTACACACTTGAACCTACTTTCTCGAAAAGCTCAAGACTCTCCTATTCTTGGTTTGACCGACTTCCTAC CGACCAAGAAACCTTCTTTCGGCGCAGCCCCAGCCAAGAACTAGTCCACTTAACGAGACGTCAAGCTAATGAAGACAACTTGTAAATCTCAACAAGATTT ACCAATGTCACAAACTTATCTACAACAATCAATACACTTGAAAGCCTAGATACAATTTTCTAAAATCAAAACCTAGAACACCTAAATGCAAATCTCATAT ACAAACAGATTATGCATGAGTTCTAAAATGGTTTTTCAGATTCAAAACTATACAGAAAATGATATGAAAGAAATGCAAGAACATGCAAGAATTATCAAAT CAAGTTTTCAATGAATGAAGCTCTCAATTCCTAAACATATGAGCTCTCAATCTAATTCTCACAATGCAAATCCTTCTAGCATACAATCCAGCACGAAAAC AATTAAGCCTAGAACATGAAATCTAATGCATGGGAAAATTATGCTAAGCTCTTGAAAAAACAGCTTTTATAGAGTGTCACTCTGCACTCATTTAATCGAT TAAAACAGGGGTTAATCGATTAACGATTTGTAAAAAACCAACTGTTTCAGTTTCCTCAACTGATCCAGTTCCAACTGTTTTCAAGAACATGTTTAATCGA TTAAGATTTGGTTTAATCGATTAAACCAATAACAAAGTTAAAATGAATGAATGAATGAACTTCCTAGATGTTATGCATGATACCTATACATGTCTAATAC TATACTTATGCGTTAAATGCATGGATAACATGTATAATATGCATGAACAACTAGATGAATGACATATCTCAAAATAATCAAATAAACATATATGATATAT ATGAGACTTGCATCTAAGTTCATCTAAACTTAAGACTCTACTAAACTAATAAGATAGTTCAATAACCCGAGTCAAAAGCACATTGAATGTTGAACTTCTT CAAGCGATCTTGGCAATTCCTTTGTCTTCATCAAAACATAATACGGAAGGTCTCCAAAGTACTCTTCTTGACATGCGTACTTTCAGAACTTAGTGGGTAA GGCAATGTAGTGAGTATATTTTGTCAGCCGATCAACAACTACCCATAACACAGTATGACCGTAAGAAGTGGGTAAGTGTGTAATGTAGTCCACTGAAATG TCTTCCCAACCCTGTTCTGGAATTTTGAGAGGTTGTAGTAACCCTTGATACTTTGTTGGCAGGTACTTGTTATACTGACAAATAGCACACTGACGAATAT GGAGCTTGATATCTTTCGCTATCCCCGGCCAATAGAAGGATGCAGTGATGCGGGCCAGAGTTGGCTTCCAACCGGAATGGCCGGCAGTTGGTGTGGCATG GTGCTCCTTCATCAAGCTGTCCCTAGATCTCCCACTTCAGTAGTGTAATAAGATTTGAGCTTATCAATAATCTGTGGACATGGTGAAGAGGTAGTGAGCA GAGTTGGCACCTCGGTAGGCTGACATATGGATAAGGCATCCGTTACACGGTTGGAGATTCAGTTACTGCAAACATCTCTCTAACATACGCAGAAGCGTGT TGCATGCGGAGAGACATTTTTTTACTGAAGAATGCAATGGGGTGACCGCCTTGTGATAGAACCGCACCAATGGCTACGACGGAAGCATCAGTTTCTACAT CAAAGATCATAGTGAAATCACGCAACCGAAGAACTAGGGTGGTCATCATTGTTGCTTTTAGTTTTGTAAATGCTGCTTCGGCAGATGTAGTTCATGTAAA ACTTTGTTTTTTGAGTAAAACGGTGAACGGGCCGGCGTGTGTGGTGTAGTCTTTAACAAATTTCCGATAAAAATCGGTGAGGCCCAAAAATCCCCTGAGA GCCGTGAGTGAACG
• Tissue: pods
• Gene name: LI_gene_194247;
• Additional information: -

Expression of Ll_transcript_463793

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0.1
• PW1: 0
• PW2: 0.5
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_463793

• Blastp: Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 45.1% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 43.86% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YIL082W-A)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450597.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;