| Id Trinity | TRINITY_DN52635_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_465533 |
| Sequence | TTTCTTTCTTTTCTTACTCCTCTTCACTTCAATTCAAACCAAAACCAAAACCAAATCTCGTAGGAACTCATGCACGCGTTACACTGAAAACGACACCGTT TTGTTTCCCCCTCAACATGGCTCAAGAACCTTACCTTCTTCTCCAGGAGCTTGGATCCAAGCTCCACACTCTTCCTTCCTCCAAAGATGGCCTCATCACG CTCCTAAAGCAAGCAACAACATGCCTTGCTGAGTTGAATCAATCACTAGAATCTTCAATATTGGGGTCAATGAAGTCGTTTTTTGATGCAATTGTTAAGC CAGAATTGCTGAAGCATGAAGATTGGGATGTCAAACTTCTAGTTGCAACTTCTCTTTGTGAGATAACTCGGATCACTGCACCTGAAGCACCTTACAGTGA TGATGTTCTAAAGGACATCTTTCAGTTGATTGTGAGCACTTTTAGTGGTCTGAGTGATACCAGCGGTCCATCTTTTGACCAGAGAGTTGCTATACTGGAT ACTCTTGCAAAATATAGATCTTGTGTTGTAATGTTGGATCTTGAATGTGATGATCTGGTGAATGACATGTTCCGTACTTTCTTCACTGTTGCCCGAGATG ATCATCCAGAAAGTGTTCTGACATCCATGCAAACTATCATGGTCGTTCTATTAGAAGAGAGTGAGGATGTTCATGAGGATCTTTTATCTATTCTACTGTC TATGCTAGGTCGTGAGAAACAAGATGTTACTGCATCTGCGAGGAAGCTTTCTATGAATGTCATACAGCAATGCATTGGAAGACTCGAACCCGCCATTAAG CAATTCTTGTTATCATTGATGTCAGGAGATATCAAGCAAGTGGGTGGTCAAGTTAAATACCATGACGTTATCTACGATCTCTATTTCTGTGCTCCTCAGA TCTTATCTGGAGTTCTCCCTTATGTCACAGGAGAGCTACTGACCGACCAGCTGGAAACCCGTTTGAAAGCAGTGAACTTGGTTGGCCTTATAATTGCTCT TCCTGGACCTTCCATTCCTGAAGTGTTTCAGCCTATATTTTCAGAATTTTTAAAGAGGTTGACTGATAGAGATCTTCAGGTTCGCATGTCAGTCCTTGAG CATGTAAAGAGCTGTCTATTATCAAATCCTTTTAGGGCTGAAGCTCCTCAAATAATTTCTGCCCTTTGTGACCGGTTGCTGGATTCTGATGAAATTTTTC AAAAGCAAGTTCTGGCTGCTATCTGTGATGTTGCATGTCATGCCCTAAATGCAGTTCCTCTTGCAACTGTGAAACTTGTTTCAGAACGGCTTCATGACAA ATCTATGCTTGTTAAAAAGTATACCATGGAGCGGCTGGCTGAGATATATCGAGTTTTTTGTGAGAATAGCTCGGACACAGTTAATCCCAATGAATATGTC TGGATTCCAGGGATGATCCTTAGATGTTGCTTTGACAAAGATTTCAGGCCAGATATAATTGAATCTGTTCTATGTGGGTCATTATTTCCGTCAGAGTTTT CAGTCAATTATATGGTTAAACATTGGGTTGAGATTTTCTCTGGGTTTGATAAAGTGGAGGTCAAGGCTCTTGAAAAGATACTGGAACAAAAACAACGGTT ACAGCAAGAGATGCAGAAGTATCTGACTCTGAGGCAAATGAGTCAGGATAAAGACAATCCCGATGTCCAGAAAAAGATCACATTCTGTTTCCGAGTAATG TCCCGTTCATTTTCTGACCCAACAAAGGCTGAGGAGAGTTTCCAGATTCTTGGTCAATTAAAAGACGATAATATCTGGAAAATTTTGACGAATCTTGTTG ACCCAAATACTTCCTTCCATCAAACTCGTGCACACTGGGATGATTTACTTAAAATACTTGGTGAGAAACATCAGCTGTATGAGTTTCTGAATACCTTTTA TGTCAAGTGCGCCCTATTGATTTTCAGCAAGGAGCATGTAAAAGCTGTTCTTTCAGAGATTGTTGTTCATAAATCTGCAGAGGATTATCAGCGTATACAA TCTTGCATGAATATATTGGTGATAATTGCTCGTTTTAGTCCATTTCTTCTCAGTGGCAGTGAGGAGGAGCTGGTGAATTTACTAAAGGATAATAATGATA CGATTAAAGAGGGTGTTTTGAATGTTTTAGCAAAGGCCGGTGGTACTATTCGTGAACAACTTGCAGTTACATCAAGTTCTGTCGACCTTATGTTGGAGAG GTTATGTTTAGAAGGCAGTCGGACACAGGCCAAGTATGCTGTGCATGCTCTGGCTGCAATAACAAAAGACGACGGCCTGAAGTCTCTCTCTGTTCTATAC AAGAGGCTTGTAGATATGCTGGAGGAGAGAACACACCTGCCTGCAGTACTGCAGTCTCTAGGGTGTATTGCACAGACTGCAATGCCTGTTTTTGAAACTA GAGAAAGTGAGATTGAAGAATTTATAATAAACAGGATTCTTAAAAGTGATAGTAAAGAAGATCAAACAAGAGCATCTTGGGATGACAAAAGTGATATTTG TAATTTAAAGATATATGGCATTAAAACCTTGGTGAAGAGTTACTTGCCGGTCAAAGATGCTCATGTTCGTCCTGGTATTGATGGTCTTCTGGATATCCTA AGAAACATGCTATCTTATGGTGAAATAACAAAGGACCTACAGTCAAGTTTGGTTGATAAGGCCCATTTGAGGCTTGCTTCTGCAAAGGCAGTTCTTCGTT TGTCCAGGCTCTGGGATCACAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_194317; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465533
| Blastp | Sister chromatid cohesion protein PDS5 homolog B from Gallus with 25.45% of identity |
|---|---|
| Blastx | Sister chromatid cohesion protein PDS5 homolog B from Gallus with 25.45% of identity |
| Eggnog | PDS5, regulator of cohesion maintenance, homolog(ENOG410XQW7) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425448.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |