Ll_transcript_463704

• Id Trinity: TRINITY_DN52652_c1_g2_i19
• Name Transcript: Ll_transcript_463704
• Sequence: AAGTACATTAACAGCCTAAACTATTTTGCTTCTCTCTCTTCTTCCATTCTTCATATCATATATCCTCATTTCATAACAACTTCAGTCAAATACAAACCCA ATATTTAAAAAAGTTGAGAGCTTTGGGTGGATGATCTTTTGAATTGAAACGTTGATTGGTTTCTTTTCAATACGCTTCTATTCTCAGTAGGAGTCGGAGG AAGACGATAAATTCAATGTACTTTAGGAGAATACAGGCCAGAGACCGGAGATGGGATTTAGTGTTTCAGCCATTGAAATACTTTTTCAGGCCAAGATTCT CTGATCATGCATGCTTTCAATCTTTGTCCCCCAAGACCACCATTAAAGAATGCACATCACATGGTTGTATCATCAGAAGACGTCTTTTAGGTTCAGATTC ATCGAACTGTGCTTTGTCCACAAATAGATGTACTACTTTGGATAAAAGGCTTAGTTTATGGAGTACACATCTGCGTGCTTATAGTTCTGAAAGTGATGGA AGAAATGCAAGTGAGGATAAGCATGTACATGTTAATGATGGAGCTAAGCTTGATAAGGGACAGGATCAACTCGATATGTTGGGGAAAAATCTCAAGTGCT GCAATGCACATGCACAAATAGGAGAACAAGATCAAGAGGAATGGCTTAATAATGAGAAGCTTTCCATAGAAAGTAAGAAGAGAGAATCACCATTTTTGAC AAGAAGGGATAGGTTTAAAAACGAGTTTATCAGAAGAATTGTTCCCTGGGAGAAGATAAATATTTCATGGGACACATTTCCTTATCACATTAATGAATAT ACAAAAGATCTTCTGGTGGAATGTGCTGCCTCCCATTTGAGACACAATAAGTTTGCTTTGTCTTTTGGCACTCGCCTCACATCTTCAAGTGGGAAAATAT TGCTTCAGAGCATTCCTGGTACTGAGCTCTATCGTGAGAGAGTAGTTAGAGCTCTTGCACAAGATTTACAAGTTCCTTTGTTAGTGCTTGATAGTAGCAT CATTGCTCCTTATGATATGGATGATGATTTATCAGACTTTGAGTCTGATGACGATAACGAAGACTCGGGGGAAGAAGGTTCAATAGAGTCGGAGAATGAG GATGACAATGATGCTAGCAATGAAGAGTGGGCTAGCAGTACCGAGGTAAAGTCAGATGCAAGTGATAATGATGATGCACTTGCACATGCTGAAGCAGCTC TTAAGAAGGTTAAAGCAGCTGTTCAGAAACTTGTTCCTTACAACATTGAAGAATTTGAGAAGATTGCGTCCGTAGGATCGGAGAGTTCTGATTCATCTAA GTCTACTGATGCCAAGTCTTCTGATAAATGTGGACGCCAGCTAAGAAAAGGTGACCGTGTAAAGTACATCGGGCCATCTGTTAAAGTTACAGCTGATGAC AGGCCTTTAACTAATGGTCAGAGAGGAGAGGTATATGAAGTGAATGAAGATCGAGTTGCTGTCATCTTGGATAATATTGAATGCAGTGCCAATGAGGGTG AGGTGGAGAACCTCAATGACGAGAATATAAAACCAGCAATATATTGGATACATGTTAAGGACATTGAGAATGATCTTGATGCACAAGCACAGGATTGCTA CATAGCAGTGGAGGCTTTATGTGAGGTTCTGAAATCCAGACAACCTCTTATTGTCTATTTTCCAGACAGTTCACAGTGGTTGCATAAATCAGTTCCTAAG TCATACCGAAATGAGTTTTTTAATAAAGTTGAAGAGATGTTTGACAAGTTATCTGGCCCCGTAGTGTTGATTTGTGGGCAGAACAAAGTTCAGTCAGGAT CAAAGGAGAAAGAACAATTTACAATGATACTTCCAAATTTTGGACGTGCTTCTAAGCTGCCTTTGTCTCTGAAACGATTGACTGACGGATTTAAAGGGGC CAAGAGCTCGGAAGATGATGATGTTCAAAAGCTTTTCTCTAATGTTTTGTGTGTACACCCACCGAAGGATGAAAACCTGCTGGCAACATTTAAGAAACAG CTTGATGAGGACAGGAAATTTGTGATTTCACGTAGCAATTTGAATGAACTGAGGAAGGTTCTTGAAGAGCATCAGTTATCATGCACAGACCTATTACATG TAAATACCGATGATGTCATTTTGACAAAGCAAAAAGCTGAAAAAGTTGTAGGCTGGGCAAAAAATCATTACTTGTCATCGTGCCTGCTTCCTTCTGTTAA AGGAGAACGACTGTGCCTCCCCTGCGAAAGTATTGAAATTGCAATCTCAAGGATGAAAGGGCAAGAAATTTTATCACGGAAACCCTCTCAGAATCTCAAG AGCCTTGCGAAGGATGAGTTTGAGAGCAATTTCATTTCTGCCGTAGTACCTTCTGACGAAATTGGAGTGAAGTTTGATGACATAGGTGCTCTTGAAGATG TGAAGAAGGCACTTAATGAACTTGTTATTCTTCCAATGAGAAGGCCAGAGCTATTCTCTCGTGGAAACTTGTTGCGGCCCTGCAAAGGAATATTACTCTT TGGTCCTCCTGGAACCGGGAAAACTCTACTGGCCAAGGCACTTGCAACAGAAGCTGGTGCAAATTTTCTCAGCATAACTGGTTCAAATCTAACTTCAAAG TGGTTTGGAGATGCTGAAAAACTAACTAAAGCCCTTTTCTCCTTTGCCAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTG GTGCTCGAGGTGGTGCTCTTGAACACGAGGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGTCAAAAGAAAACCAAAGAAT CCTCATTCTTGGTGCAACAAACCGACCATTCGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATATTGATTTACCAGATGCTGAAAAT CGAATGAAGATTTTGAGAATACTGCTTGCACAAGAAAATTTGGTTCCTGATTTTGAGTATGATAGACTTGGTAAGTTGACTGAAGGATACTCTGGCAGCG ATTTGAAGAACCTTTGTATTGCTGCTGCATATAGGCCTGTTCAAGAGCTCATAGAGGAAGAGAAAAAGGGAGGCAACAATGGTATACCTTCGGTATTAAG GGCTCTTAATGTAGATGATTTTGTTGAGTCAAAAGCTAAGGTGGGGCCATCAGTTGCATATGATGCAACAAGCATGAATGAGTTGAGGAAGTGGAATGAA ATGTATGGAGAAGGTGGTAGCAGGACAAAATCACCATTTGGATTTGGGAGCTGATTTTGAAGATTCTTTAACTAACTTATGGCAAAGAGTAATTCAGAAA CGTAGTGTAGCCTATAAATTGGTTTAGGTAAAATTTTACTTTATGTATAAACGTGTAATTTCCCCATTTATCTATGTGCTGTTCTCACGCATCATAAGTA ATAAAACACCACTTTGGTATCAATTTTCATGCACTCTAGAAGTGTTAATACAATTGTCCAATAGTCGTGATAATTAAAATAAAAGCAAATTGTGA
• Tissue: pods
• Gene name: LI_gene_194438;
• Additional information: details;

Expression of Ll_transcript_463704

FPKM

• PAB: 2.6
• PNAB: 6.5
• PS1: 7
• PS2: 4
• PS3: 5.6
• PW1: 4.5
• PW2: 4
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_463704

• Blastp: Spastin from Xenopus with 47% of identity
• Blastx: Spastin from Xenopus with 47% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (446560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450941.1)
• Pfam: Holliday junction DNA helicase ruvB N-terminus (PF05496.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;