| Id Trinity | TRINITY_DN52656_c1_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_464564 |
| Sequence | CTTTGTTCAACTTAGAGCACAAGTTAGAAGTATTCTCCTTTTCAATCTCATATAAATTCCTCTTAACAAAACCACTCAAAGTTCATATCTTTCTTTTTAT TTTACACACAAATCAATTTCTGAGAAATCATCACCATCAATCAAATTCAATGGCAAATGATCATGAAGAAGATTTCAAGGATGAGAAGAATCCTCGCCCT CTCGATGAGGATGACATTGCTCTCCTTAAAACCTATGGCCTGGGACCTTATTCCACAAGTATAAAAAATGCGGAGAAGGAAATCAAAGATATGGCAAAGA AAGTCAATGATTTATGTGGTATCAAGGAGTCTGATACTGGTTTGGCTGCACCAAGCCAGTGGGATCTTGTTGCTGATAAGCAAATGATGCAGGAGGAGCA GCCTCTTCAGGTCGCAAGATGCACAAAGATTATAAATCCAAACTCTGAAGATGCCAAATATGTTATCAATGTGAAGCAGATTGCAAAGTTTGTTGTTGGG CTAGGTGACAAAGTTTCCCCCACAGACATAGAAGAAGGGATGCGTGTTGGGGTTGATAGAAATAAATATCAGATTCAGATTCCTTTGCCACCAAAAATTG ATCCAAGTGTTACCATGATGACAGTTGAGGAGAAGCCAGATGTGACATATAACGATGTCGGTGGTTGTAAGGAACAGATTGAAAAGATGCGAGAAGTTGT GGAATTGCCCATGCTTCATCCAGAGAAATTTGTCAAGCTTGGAATTGACCCTCCAAAGGGTGTTCTTTGTTATGGTCCACCAGGAACTGGCAAGACACTT TTAGCCAGGGCTGTGGCTAATAGGACTGATGCTTGTTTTATAAGGGTTATTGGAAGTGAGCTAGTTCAGAAGTATGTTGGTGAGGGGGCTCGGATGGTTC GTGAGCTATTTCAGATGGCTCGTTCGAAGAAGGCATGCATTGTGTTTTTTGATGAAGTTGATGCTATAGGAGGTGCACGATTTGATGATGGTGTTGGTGG TGACAACGAGGTTCAGCGTACAATGCTTGAAATTGTGAATCAGCTTGATGGGTTTGATGCTCGTGGAAACATCAAAGTTTTGATGGCTACTAACAGGCCT GACACTCTTGATCCAGCATTACTACGGCCTGGACGATTGGATCGTAAAGTTGAATTCGGCCTTCCTGATTTGGAGAGTAGGACCCAAATATTCAAGATTC ACACAAGAACAATGAACTGTGAGAGGGATATCCGATTTGAGCTTTTAGCTCGGCTTTGCCCGAATTCAACTGGAGCTGATATAAGGAGTGTATGCACTGA AGCTGGTATGTATGCTATCCGAGCCCGAAGGAAGACGGTAACAGAGAAAGACTTCCTTGATGCAGTAAACAAAGTCATCAAAGGGTACCAAAAATTCAGT GCAACTCCCAAGCACATGGTCTACAACTGAGATACCATATTAGCCTGTTACCAAGTGATATTTCATTGAGGAATGCAGGAATATCTTGTTGAATCTAGAT AAAATTGTTTCCTCCATCCATTATGTGTTCTGTAGTAGACATAGCAATCTTGATCTTGTGCTGACCCTTCTTATAAGTAGGAGTTGCGAAACACTTGTTC TGACTTCAACTCTCATAGGGTTAAATGTCAACTTATTGCATCCATTTGTTTATTTTCGTTTTATTACCTTAGTGGAAAGTCAATGCAGGTAAGACTAGAA ACAAAATTGCATATACTTGTGCAAGAATACACAAGACATGTATATTCCAATGTTCGTGCCTGTGTTTATTTCCCTGTGAGTTTAGTCTGGTACTTGAGTA TTGTCTTGCTATAACTATTGATATCCAATTAATATGTTTTCCAACATTAAGGACTTTGTGCTGTCTAACAAGGTAATGTAAATACTTAGATGATGGCATT TGGTAGACCCATTGGAACTCATCTCAATGATGTGTCCCACATAATAGACGCTTGTAGCCATTAGAATTGTGAACTCTTATTTGAAGCTTCCATGGCTTCA CCTTTTTGATGAGATTGGAAGTGGATTTCTAGGAATTACATATAATCTAAGAAATGAAGAACAACCAATATGGATTCCTATGGAAGAAAGGAAACTGACT TTGTATTATTCAATATGAAATGAGAGATGCAAGCTTAGAATTGGAGAGAAGTAAAAGCGCCAGAAGTACAACTATGACACTTGGCAGCAAAAATACCCTA TCAGTATTGGATTGGGTGTTAGTAAACATCCGAATTTTGTAAACAACCTTTGTCCAAGATGGGTTATATGTAATATGCACTTTACACTATTCTGTTCTAT TTAGCTAACAATAAAAATGCTGAACATGACTTACATGTCTTTTTCTGACTTACAAGTCTTGTTCTGTTCTATTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_194475; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_464564
| Blastp | 26S proteasome regulatory subunit 7 from Spinacia with 96.95% of identity |
|---|---|
| Blastx | 26S proteasome regulatory subunit 7 from Spinacia with 96.95% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423671.1) |
| Pfam | ATPase family associated with various cellular activities (AAA) (PF00004.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |