Ll_transcript_462827

Id TrinityTRINITY_DN52657_c0_g3_i8
Name TranscriptLl_transcript_462827
SequenceGTTCGTGCGCGGTACTCTCACAATGCAAAATCTTTCTCCTTCACTTAGAAACTCTCAACTCCCTATTCCTTCGTTTTATTGCATTCTCTGATTCGCACTG TGATTATTCTCTCTCTCTCTCTCTCACTCTTTCTGTCGTTTTTTCAATCCTTTTGCGTTTCGTAACTGTTCCCATTCATGGCCAAGGGCGTAATCTCAGA CGACGAAGATGAGGTTGAACTCGACGAGGAGGAGAGGGAACCGGTCGAGGGGGATGGATTAGATGAGGGTCGCGATGTGGACGATGATGAAGATGAAGAA GAAGAAGGGCAGGATGAATATGAAAATGATGGATTTATAGTTGATGAGGATGAAGAGGAGCAGGATGAAGAAGAGAGAGCAGAAAGTGATGAAGAACGCC ACAAGAGGAGAAAGAAGAAGAGAAAGGAGGAATATATTCTTGATGAAGATGATTATGAGCTTCTGGAAGACAATAACATCAATATTCATCGTCGGAAGGA CATTAAAAAGTTCAAGCGACTGAAAAAAGGCCAGAGGGATACTGAGGAGGAACCATCTGGGCTATCTGATGAGGAGGATTTTGTTGGAAGTGGTAAAGTT GGGCGAACTGCTGAGGAGAAGCTTAAACACCGTTTATTTGGTGATGAAGAAGCTTTACTTGAGGATATTGTTGAAGAGGAGGAACAAGGAGAAGAGGAGG AGGATGCAGACATTGGAGAAGATGATGAAATGGCCGACTTCATTGTGGATGAAGAAGAAATTGATGAGAATGGAGCTGCTATGAGGCGAAGGAAGCCGAA GAGAAAGAAAACTAGGCAGGCACCTGGAGTCTCTTCCTCAGCTGTGCAAGAAGCTCAAGATTTATTTGGTGATGTTGAAGAGTTGCTGCAGACTCGCAAG AAAAATCTAGAGCTACATGAATATAGAGAGACTAGACTTGAAGATGAATTTGAGCCTATTATTATTTCTGAGAAGTATATGACAGAGAAGGATGACGTGA TTAGGGAGGTTGATCTTCCAGAGAGAATGCAGATATCTGAGGAGAGTACTGGTACTCCTCCACTGGATGGAAGTATAGATGAAGAGAGCCGGTGGATAGT TAAGCAACTTAGTGATGGAGCAGTCCCTTGGATTTGCAAAAAAATTTCTACGCCCCAAAATAATAGAAAGAACCTACCAATTGACGAGAATGATATTATC AGATTTTTGGAACTGTATCATGTGCAAAAATTAGATATTCCTTTTATTGCTATGTATCGGAAGGAGGAGTGCTTAAGCCTATTGAAAGACCTAGAGCGAC ATGAAGCTAGTGATGAGAATTCTGATAAGAATAACATGACACCTGCTCTAAAGTGGCACAAGGTACTTTGGGCTCTTCAGGACTTAGACAGGAAGTGGTT GCTCCTTCAGAAGCGGAAGAGTGCCTTAGAATCATACTATAGTAAACGGTTTGAAGAAGAGTCCCGACGTATTTATGATGAAACAAGACTAAACTTGAAC CAGAAATTATTTGAATCAGTAATGAGATCATTGAAGGAGGCAGAATCTGAGAGGGAGGTTGATGATGTAGACTCCAAGTTCAACTTGCATTTCCCACCAG GTGAAGCCGGTGTTGATGAAGGACAATACAAGAGACCAAAAAGGAAGTCCATATACAGCACTTACAGTAAGACAGGTCTGTGGGAGGTTGCGAACAGGTT TGGGTGTAGTTCTGAGCATCTTGGAATATGTCTATCTGAAGTTAAGGTGCCTGAGTTGGTAGATCCAAAGGAAACACCAGAGGAGATGGCTTCAAACTTT ACATGTGCTATGTATAATACCCCTGAAGAAGTACTTAAATGTGCTAGGCACATGGCAGCTATTGAGATAAGTTGTGAGCCTAGCATTAGGAAACATGTTC GTAGCCACTTTCTTGACAATGCTCTGGTGTCAACTTGTCCTACTGCCAGTGGAAATGTGGCAATTGATTCTTTTCATGACTTTGCTGGGGTAAAATGGCT GCGAGAGAAGCCTTTGTCTAAATTTGATGATGCACAGTGGCTCCTCATACAGAAGGCAGAAGAGGAGAAACTTCTTCAAGTCACTATTAAGCTTCCTGAA GAGAATCTTAATAAATTGTTAGATCAATTCAATGAGTATTATGTTAGTGACAGTGTTAGCAGATCTGCTCAACTGTGGAATGAACAGAGGAAGTCCATAC TGCATGAGGCCATTTTTCGACTTGTTCTACCTTCAATGGAAAAAGAGGCAAGAGGAATCTTGGCAAGCAAAGCAAAGAATTGGCTACTTATGGAGTATGG GAGGGCCTTGTGGAATAAGGTTTCTGTCGGACCTTATCAACAGAAGGAGAATGATCTTAACTCTGGTGATGAGGCTGCTCCTAGGGTTATGGCATGCTGT TGGGGCCCCGGAAAGCCACAAACAACTTTTGTTATGTTAGATTCATCAGGGGAAGTGCTAGATGTGCTTTACACTGGATCCCTTACTTTAAGGTCGCAGA ATGCTAGTGACCAACAACGGAAGAAGAATGACCAGGACCGTGTGTTGAAGTTTATGACAGATCACCAACCACATGTTGTCGTTTTAGGTGCAGTAAATTT GTCTTGCACTCGTTTAAAGGAAGATATATATGAGGTCAGAATTTGGTTTTTATGCATGCGTCATTATTTTGGTTCCATTCCATTCCATTCAACCAATCAT GCACCCAATGGTTTGTTTTATATATGTACAAATTTTCTCAAATAAGCAATTACTCTGGGCACATATAACTACCCTCCTCAGGCCCCATTAGATGGGAGCC TCATGCATTGGGCTGCCGTTTAAAAAGGAATTACTCTGTTCAAGCCTCCTAATCATCATAGTGTGGCCATGTAATACTTATGCTGTTATGCATTGAAGTG AGTAATGTAATTTTCTTAGTATAAGTTGGGGTGAAACCATTTGATAAGTAGAATTAGTAGTTATGTTTTCATCCTACTGGAGAAGTCGGTATTTGGTCAT AATTAACCCATACTAATTTGCCAGAGTCATGGTGTTTCAAGTTTGAATTGGGAATTTCTTACAATTCTTTCGATCCATGTATATAACCCTGTCAAGTGGG AAAAGACTTTTGCTGTTGTTGCATCTTGGTTCATATATGTGGTTTGCTCTACTTTTATTAGGTCATTTTTAAGATGGTAGAGGAAAATCCTAGAGATGTT GGGCATGAAATGGATGGGCTCAGTATTGTGTATGGAGATGAATCTCTTCCCCGTCTTTATGAAAATTCTCGAATTTCCTCTGAACAACTTCCTTCGCAGC AAGGTATAGTGAGGCGAGCTGTTGCTCTAGGCCGATATCTCCAGAACCCATTGGCAATGGTTGCAACCTTATGTGGACCCAGAAGGGAAATTTTATCCTG GAAACTGAGCTCTTTAGAGAGCTTTCTCAACCCAGATGATAAGTTTGGGATGATTGATCAGGTTATGGTAGATGTGACCAATCAGGTTGGCCTAGACATC AATTTAGCAATAAGTCATGAGTGGTTATTTTCTCCTTTAAAATTTATTTCTGGGCTTGGTCCACGTAAGGCTGCATCCTTACAGAGATCCTTGGTTAGAG CTGGGGCAATTTTTACCAGGAAGGACTTTTTGAAAGAACACAAACTTCAGAAGAAGGTTTTTGTCAATGCTGTTGGTTTCTTGCGTATCCGGCGAAGTGG GTTGGCTGCTAGCAGCAGCGAATACATTGATTTGCTGGATGATACAAGAATTCATCCAGAATCGTATGCTGTTGCACAAGAGTTGGCCAAAGATGTGTAT GACGAGGATGGCACAGGTGATGCAAACGATGATGATGATGCATTGGATTTGGCCATAGAGCATGTCAGAGAACGACCTAGTTATTTGAAAAACCTTGATG TTGTGGAATATGCTACTGCGAAAGAAGAGCAAAAAAAGAAACAACAATCAAGCCTTGTTAACCTTCTAAAGAAAATAGAAACTTTGTATGACGTAAAAAA TGAATTGATTCAAGGTTTTCAGGATTGTCGTAAGCAATATGAAGAACCAAGTCAGAATGAGGAATTCTATATGATTTCAGGTGAGACTGAGGAGACCCTT GCTGAAGGTAAAATTGTCCAAGCCACAGTTCGCAGAGTGCAGGCCCAGAAAGCAATATGTGGGCTTGACTCTGGAATGACTGGAATCCTGATGAAAGAAG ACTATTCAGATGAATATAGAGATATAATTGAATTATCTGATAGGCTACATGAAGGCGACATGCTCACTTGTAAAGTCAAGTCAATTCAGAAAAATAGGTA TCAAGTCTTCCTTGTTTGTAAGGATAGTGAAATGAGAAGTAACCGGCTACATAATAGCCGTGATCTTGACCCTTATTACTATGAAGGTCGAACCTGTTTG CAGAGTGAACAAGATAAAGCTCGGAAAGAAAAAGAGCTTGCAAAGAAGCATTTCAAGTCAAGGATGATTATTCATCCCCGCTTTCAGAACATAACTGCAG ATGAAGCAATGGAGTTTTTATCAGGCAAAGATCTTGGGGATAGCATTGTCCGCCCTAGCTCACGTGGACCAGAGTGTCTTACTTTAACTCTCAAAATCCA TGATGGGGTATATGCACACAAGGAAATTGTCGAAGGTGGAAAGGAACGCAAGGACATTACTAGCTTACTTCGAATTGGGAAGACGCTAAAAATTGGAGAT GACACTTTCGAGGATTTAGATGAGGTTATGGACCGTTATGTTGATCCCTTGGTGACTCACTTGAAGGAAATGTTAAACTATCGCAAGTTTAGAAGGGGTA CAAAATCTGAAATAGATGAACTTTTGAGGATAGAAAAAGTTGAAAATCCTCTGCGCATAGTCTACAGTTTTGGCATCTTGCATGAACATCCCGGGACATT TATACTAACTTATATAAGAAGTACGAATCCACACCATGAGTATATTGGGCTTCATCCAAAGGGATTCAGGTTCCGAAAAAAGATGTTTGAGGACATTGAT AGGCTTGTGGCTTATTTTCAGAGGCATATTGATGATCCTCAACATGATTCCACTCCCTCCCTTAGATCTGTTGCTGCTATGGTACCAATGCGAAGTCCTG CAGCTGGTGGCTCATCAAGGGCATCTGGGGGTAGTGGCTGGGGTAGTTCAAACAACGAAGGTGGCCGGAGAGGCGACTCTTATGCTAGGGATCGATCTTC TACTCCTGGTTCCAGGACAGGTATATTAATTTTGAATTCAGCTCTAGCTTTAGTCATGACACATTATTGTTGGAAAGGGATGGCTTTTTAGCTAAATAAT TATACAGGTCTGGTTATTACTGAATCTATGTACTCTTTCAATCATTTATAATCTGCTTCTTTGATGTTAATTTAGTAACAAAAGTCTTCTCCTGCTATTA ATATGGTTGATTGGTTTTCCTTCCCGTCACCTGCTGTTCTTTGTCTATTCACATGTCATCGGATGAATTGTTTTCACTGGTCATTTATTCAGTTAGACCT GGTAATTGGATTCAATCAAAATTTTGATTACGCTCCTGTCTGTTTTATTTTACAGGACGGGCTGATTATAGAAACAATGGTAATCGAGATGAACACCCCA GTGGGTTGCCCCGTCCATATGGTGGTGGTCGTGGCCGTGCTCGAGGTTCTTATAATGACAACAGAGGACATGGCTCCAATAATGAAAGGCAGGACTCTGG CTATGTTGGGAGCAGATGGGGTTCTAATACACGCGAGGGGGGTGACGGTTTAAGCAATTTTCCAGGAGCTAAGGTTCAAAATTCCCCTGGAAGGGAAGCT TTTCCTGGTGGTTGGGGTGGTGGAGCTGGTTCAGGTGATGCTGAACATGGAAGCTCTGGGTCGGGAACTGGCTCCAAGAAAGCATCCGACAATGGGTGGG GGTCTGCAATTGCCGGCGCTGGCTCTGGTTGGTGAACTCTTGAGAACCCAGTTTAACTGACCGGCAGGCAGGCTACTTATGCCATTCATTTTCTTCTTTA GTGCCTGCTTTCACATTGATTATTTAGTTGTAAATAGATTTGACCTTAGAACAAATGTACTTTGAATGTTCCTCTGAACGTTTTTGTTTTTGCCTGATAT GAAGGGTAGGAGAGTTTTATTAAACCTAAGGGATTTTCAAATGTGGTTAAATGATGCTGACAGTGTTTATTTATGGATTGCGTGGTATGAAAATATTTAC CTCTTTCTCCATTCATTTCTACGATTGTTGTTCATGTTCTTGGATTATATTACTTTTTTTCTTCATAAAAAA BLAST
Tissuepods
Gene nameLI_gene_194479; 
Additional informationdetails; 

Expression of Ll_transcript_462827

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_462827
BlastpTranscription elongation factor SPT6 homolog from Arabidopsis with 61.2% of identity
BlastxTranscription elongation factor SPT6 homolog from Arabidopsis with 73.37% of identity
Eggnogdomain protein(COG2183)
KeggLink to kegg annotations (AT1G65440)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019447115.1)
PfamAcidic N-terminal SPT6 (PF14632.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;