Ll_transcript_464633

Id TrinityTRINITY_DN52662_c2_g2_i1
Name TranscriptLl_transcript_464633
SequenceGCCACATCCTGACACAGACCAAGATGATCATGAGATTGATGATGATGATGATTTTGATGAAGTGATGGAGGAAGAGGACGAAGATGATGAGGAAGACGAG GATGGTGTTATACTGCGACTTGAGGAGGGCATAAATGGAATTAATGTTTTTGACCATATTGAGGTTTTTGGCAGAGATAATAGTTTTGCAAATGAAAATT TTCATGGGATGCCAATTGAAGTTTTTGGATCCAGACGTCCAGGGCGGACAACATCTATCTACAGTCTTTTGGGCAGAACTGGTGATACTGCCGCACCTTC TCTCCATCCACTCTTAGTTGAACCTTCCTCCTCATTACCCCAATATACAACGCAATCAGATGATGTACTAGAGAACAACTCATTGAGCTTGGATAGTATG TTATCACTGAGTAGTGGATGCCATGAACGTTGTATGAACTTATGGACTGATATTATCCTGCAGAGTGGTGAGTCAAACACTGGTGTTGTGCCACATGGTT TTGAGGAGTTGTTTGTCTCTCAATTAAGGCAACCAACCCCTGAAAAGTCATCCAACCAGAACATAGCAGAAGTAGGTCCTCATAGTAAAGTCAGCCAGAC ACAAGATTCAGGTGGTGCAAGAGCAAAAGTCCCTGCTGAAAGTAATGCAAATCTGGAAGTCAGTACTTCAACTCCTTCAATAGTTGAGAACAATAACAAT GCGAATATCAGACTTGCAGGAACCAGACATCTGCAAACAGATGTGTCCAGCACTTACACCCAGGCAGTTGCAGTGCAGTTTGAGCATAATGATGGGGCCA TGAGGGATGTCGAAGCTGTGAGCCAGGAGAATAGTGGTAGTGGAGCAACTTTTGGTGAAAGCCTTCGGAGCCTAGACGTAAAGATTGGATGTGCTGATGG ACATGATGGTAGTGGAAAAAGACAAGTTTCTGCAGATAGGACAGCAGGTAATTCACAGGCTGCACACACAAGAAGATCGAATTTGCCTCTAAGTCATTCC TCTACTGTAATTGGAAGAGATGCATCCCTTCATAGTGTTACTGAAGTTTCTGAAAATTCAAGTCGTGATTCAGATCAAGATGGTCCAGCAACAGAGCAGC AGGAGACCAGTGATAACAGGTCAGGAGGGGTTGGCCCTGCTTTTCTGGATGCCCTTCCTAAGGAGCTGCGTGCTGAAGTCCTCTCAGCTCAGCAGGCTCA AGTGGCTCAACCATCAAATGTTGAGTCTCAAAACACTGTGGATATTGATCCAGAGTTCCTTGCAGCTCTTCCCTTAGATATCCGAGCAGAAGTTCTAGCT CAACAGCAAGCACAGAGGTTGCATCAATCTCAAGAGTTGGAAGGTCAACCTGTAGAAATGGATACTCTCTCAATAATTGCAACATTTCCTTCAGATTTAC GAGAAGAGGTTTTGTTAACTTCACCTGATAATATCCTTGCCAATCTTCCACCTGCTCTTGTTGCTGAGGCAAATATGTTGCGGCAGAGGTTTTCATACCG TAGAGGTGAAGCTTCTAGACATGAAAGTGTTCGTTCTGACTTGAATGGAGTGAGGGGGGATGTATATTCACACCTGTCCAGTGGAGCTAAGGTTGTTGAA GCTGATAGAGCACCTCTGGTTGGCACAAAAGCTTTACATGCTATGATTCGGTTGTTTCGGATAGTGCAGCCACTTTATAAAGGTCAATTGCAGAGGCTTC TTTTAAATCTATGTGCTCATAGTGAAACAGGAACCTCTCTAGTGAAAATTTTGATGGACTTACTGATGCTTGCTGTAAGAAAGCCTGCCAATTATTATAG TACAGTTGAGTCACCATACAGGTTATATGGTTGTCAGAGTAATGTGATGTACCCACGTCCTCAATCTTTTGATGGTGTTCCCCCATTGCTGTCTCGGCGA ATACTTGAAACTCTCACTTACCTTGCTCAGAATCATTCATATGTGGCAAAAAAATTGCTTCTGTCTAGGCTGCCTTATCCTTTAATAAAATCAGATAATG CTGATGCATGTGGCAAAAGTGATGAAGGCTGCATATCCATTGCAATACTCTTAAGCCTCTTGAACCAACCACTTTTCTTGAGGAGCATAGCCCATCTTGA AAAGCTGCTAAATTTGCTGGATGTTATCATTGATAGTGCTGGAAGCAAGTCTAGTTCACCTGACAAATTCCAGATTTCTGCTTCTAATCCGTCATCGGGT CCACAAATTTCTTCACCGGATGCAAATGTGAATACAGATTTGGTTCTTATGCCTTCTGGGGTTGATACCTCTAATGAAATTGATGGCTCTTCCAATCTCA CTTCCTCTGATCATAATATGGAAACTGAATCTCCCAGAGTTTTGAGTAATCTGCCACAAGCAGAGCTCCGTCTCCTGAGTTCATTGCTTGCACATGAAGG AAGTAATGAAGAAATTGGTAGTCATTGCTCCAACTCATCGCCAGCTTTTTGTCACCGAGCTTGCAGAAGCTGTTCGAAACTTGACTTCATCAGCAACAGA TCAGTTACACATCTTCTGTGAAGCAATGAAATCTCTTAGCACCACATCTTCTGATGGAGCTGCAGTTTTGAGAGTCTTGCAAGCCTTGAGTTCTGTTGTC AATTCATTGACTGAGAAAGAGAGTGATATAGTTACTCGTGCTGTTATTTCTCAGGTTTGGGAAATCAATTCAGCACTAGAGCCACTGTGGCATGAGTTGA GCTGTTGCATACACAAGATAGAGTCCTGTTCCCAATCTGCATCTGATTTTTTCACCCTTTCTAGCACATCTGTGTCTAAACCCTCTGGGGTCATCCCATC ACTTCCAGCTGGCTCTCAAAATATTTTACCATACATTGAGTCTTTCTTTGTGGTTTGTGAGAAGTTACGTCCTGCACAGCAAGGTGCTAGCCATGAGAGC ATTCCTGTTGTTTCTGATGTTGAGAATGCAAGCACGTCTGCAATTCCTCAGAAATTATCTGGACCTGCTGTGAAAGTAGATGAGAAAAATGCAGCATTTG TCAGGTTCTCTGAGAGGCATAGGAAGCTACTTAATGCTTTTCTTAGGCAAAAGTCTGGTTTGCTGGAGAAATCTTTCTCACTCATGCTTAAGGTTCCAAG ATTTATTGATTTTGATAACAA BLAST
Tissuepods
Gene nameLI_gene_194516; 
Additional informationdetails; 

Expression of Ll_transcript_464633

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_464633
BlastpE3 ubiquitin-protein ligase UPL1 from Arabidopsis with 40.85% of identity
BlastxE3 ubiquitin-protein ligase UPL2 from Arabidopsis with 42.05% of identity
Eggnogubiquitin protein ligase(COG5021)
KeggLink to kegg annotations (AT1G55860)
CantataDBLink to cantataDB annotations (CNT0001834)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019434286.1)
PfamDomain of unknown function (DUF4414) (PF14377.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;