| Id Trinity | TRINITY_DN52681_c1_g2_i14 |
|---|---|
| Name Transcript | Ll_transcript_465061 |
| Sequence | AGGTGCTGATAATGTAGTGGACCCTCGAAGACAAATTGATGAGCGGGCTCTGGAGAAAGAAGAGGAGCACTATTTTAATGAAGACAGTGACGAGGAAGGT ATAGCCTATGCTTCTTCTCAGCCTAATGAGAAAGGACTGCAACAACCTATATCCAATGGAGTTGCTGCAAGCTATTCGAATTCAAGAATGGTTGACTATG ATGATGATGAAGATTACAGGCCACCACCAAAGAAGCTGCCTGAATCTTCTGAGGAAGGGACAATGGAGTCTCCGAGGCAGAAAAGGAAATTACCTTCAAA GGATAAGGGGCCCGAACTTGTGAAGAAGCAGAAGTTATCCACGAATTCAAGATTTAAAGATAGTGTTTTTTCTGCTTTGTGTTCATCATCGAGCCAAGCT ATGCTACCTGACAAGAAAACCGCTACAAACATTCATACAGGTGTTCAAACAGTTGAAGGGAAAATGAGCTCAAATGAAGATAATCAAGATGAAAGGTCAA ATGTTTCTAGAAGTTGCTCTCATAACAATAGCAGCAAAGTAGCTGAAGATAACCATGTAGAGAAAGAAACTGCAGCCTCTAGAAGCTGTTCTGATTGCCT GCGTGGCACATCAGATAACATACCGATGGGTGGAGAAGATCATCCATTGGTTCCTTCAAATTCCTCGCCAGAGATGGCAGTAAATGGATCATAAGCTTTT AGAATCATTTGCTTGACTGTAAAATAGTAAGACAGGGGAATATTAAGTAGTGGGGGAAATTCTGATTATGTGTTCCGTCTAGGACATGTTGAGATACTGT ACAGTGCCATTAAGTGGCTCGGAAGATAATTAATACAGCCAGTGGGTGGATCGGCTCCTATTCTCCATGCTTTCTATTTCGGGCATTTAGCTTAGTAATT GTTGCTTTTGTATAACATTCTCAGACTTTTTCTTAACTCAATTTTTGCTAGAAGAATCATGGTGTGGGTTGTGGTGATCATGTTATCACCAACCCATTTT CAGTTATTTGAACTTGGTGATAGAGGGCGCCAATGTTTGCCCTTCACAAGTTTTCCCTTTTGGTTTTCTTTTGTTTTTTGGGCGGTGGGTCTGTTAGCAG GGATATATATGTTCAGTAATTTCTTGGTCCAAAATTTCAACAATATGCTTGGGAACCATCATCCGTTGTAAATATGTTATGCAACGGACTTTTCATGCAG CTCTTTCACATTGCAACTGGATTCACATTTGTTTTCCACAGATCATGATTTATCGTGTATTTTGATTTCAACTGAATTGAAGTTTTAATTGCCCGACCTT TATACGAAAGCCTTATTTCTCTTTTCATCCTATGACTGTGGTTGAAGTAGGCCTGTTTACTGCCGTGTTAACCTTGGGTTTGTTTGGTTTGGCACAGTTG TTATAAAGTTTATACACATTTTTGGAGTCTAACGGGTATATATAGAAGTCTTTTCTTTCACTTCTTTTTCCTTTTAAAATCTAACTCTCAAATAAACTAT AAGCAATTTGTTATTTGTATTATGCTATCCAATTTTGAAGGATATAAGGTCTAGGGACATAACGAATAGGAAAATGTCTCAAAAAAGTAGTTTGTGAATA TTACACTGGGCTTGATTTGGAGAGGTGTCGCTGAAACAGTTAATACGAGTGAGGTGGTGCGCATCATCGGATTTTGAGACACGTGTGCAGTGTGTTGCAA ATGTGTCGCCACCAACTGCGCATTCTTGTAATTTAGGAAGATCCACATGTGACTCATTCAAACACGTGTTATCCTATCCACTATTCTTCCCCATGTCATG TTTTCTTGTCTCTGTCTGTTATCATTTACTAACTCATCACTTTCCTTTCCCTCTTGTCTCTGTTTGTTTGTTTTAGTGTATAGTTAGTGGAAATCAATTA AGGAATTAAGATGAACAGCGGAAGCAGCAACTTGGAGACACGGTCTGTGTTGGATGAGCTAAGTAGCTTTAACAAAGGAGGACTCTTCGATCTTGGACAC CCTCTTCTCAATCGTATTCTTGACAGTTTCGTCAAAGCTGCAGGGATAGGTGCTGTTCAAGCTGTGTCCCGTGAGGCCTATTTCTTCACTGCTGTTGAAG GTTCAGGAGGGCTAGATAATGCAGGTGGTATGCCGCTAGAAGTTGGTGGCAAGAAACATCGTTTGCCTGGTCTCAGAGGAGAGACCAGCAGCAAATCCAT TGAAGCTATGGTGAAAAATACCGGCAAAGAGTCCTTTCAATGGGGATTGGGTGCAGGAATATATTCAGGTCTCACCTATGGGCTGAAGGAAGCTCGTGGA GTTCATGACTGGAAAAACAGTGCAGTTGCTGGAGCACTTACTGGGGCAGCACTTGCAGTTACATCAGACAACTCATCTCATGAACAGATTGTGCAATGTG CTATCACTGGAGCAGCAATCTCCACTGCTGCAAATCTTCTCACTGGAATATTCTAAACGGTTTAATTTCCCGGTTAAGATTGATTAATATTCCTGTGTTA TATATGCAGAAGTGCAAAGATCCTCAAATCTAATATGTTCTTAAGTGTCTTCCATTTGGGTGAATAGTTAGTTGGTTATTAGAGGAATCTCAAGCTTTCC TTTCTAAAAACTAACTTGTAAACAAATAAGTGTTTCCCTTCTAAAAGCTAGACTTTGGTGCAAACTTTTTGAAGTTGCCATTAACTTATGATTTAGGGTA CAAAATAAAAAGTCAAGTTGAATAACATGAGGGGTTCACTTTTAAGGGGGAAAACTTATTTTGATATTTGAAAATAGTTTTACTTGATCAAAATTTCTGA TATTTGAAAATTATGAATCTTTTTTTCTAGCAAGTATCTTCTCAATGTGCAAAAAAAAATACTCCATATTAGCATGCCTGGAATACATTATCATTTCTAT TTTCACAATTATCCTAAAATACATAATTTTGTGCTGTTTTCACAATTATGCTTGTGAAGGGGTACAAATATGAGTTTAAGAAGATTGAAAGTGGGAAACT TATTCACCAAAAAACAAATTATGGGTTACCTAATTTTTGGTTTTAAGGGAATGAGGGAAGAATCAAAGATTAGGAGTATGATGAGATGATTCACGTACTA AAATTGAGTTATGTTAGATAATGTCACTTTCTAAATATAGAAGGCTAAAGTTGAAATATTATTTTCATAAAAATCTACCTAAGATATTTTCTAAAAGGTA GCTATCAATAGTCACAAACTCTCATTTTTAAAAGTCAGACATTTCTCTCATTTTTTTATTCACTAAATAAATCTGTAAATTTATTGATCCGATCAATGAG CTATAATATTTTATCAATGCAATATCATTATATTATTTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_194674; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465061
| Blastp | - |
|---|---|
| Blastx | Outer envelope pore protein 16-2, chloroplastic from Arabidopsis with 66.09% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462799.1) |
| Pfam | - |
| Rfam | - |
| GO | - |