Id Trinity | TRINITY_DN52693_c1_g1_i4 |
---|---|
Name Transcript | Ll_transcript_462994 |
Sequence | GAAAGATTGGAGAACCGCATTTCTGAAAGATCGGAGAACCGCATTTCTGAAAGATTGGAGAACCGCATTTCTGAAAGATCGGAGAACCGCATTTCTGAAA GATTGGAGAACCGCATTTCCGAAAGATCGGAGAACCGCATTTCGGAAACGGTGGGGTTTTCTTTGAAGAATAAGGCAAGTGCTCCAACCAAATCAGGGGT TCCTTCGAAGGAGCAAACTATGCTAGAGGGGCAGAAAACCAAGAATCATGGTTTCACCCAATCCAAAACCCTCGGCAACAAATATATGCTAGGAGATGAA ATTGGGAAGGGAGCTTATGGTTGGGTTTTCAAAGGTTTGGACCTAGAGAATGGAGACTTTGTTGCAATTAAACAAGTTTCTTTGGAGAATATTGCTCAGG AGGATCTCAACATCATCATGCAAAAGATTGATTTGTTAAAGAATTTGAATCACAAAAACATTGTAAGGTATCTTGGATCCTTCAAGACAAAGAGTTACCT GCACATAATTTTGGAGTATGTTGAGAATGGCTCGCTTGCAAATATTATCAAGCCCAATAAATTTGGACCATTTCCAGAATCATTGGTTGCAGTTTATATT GCCCAGGTGTTGGAAGGCTTGGTTTATCTACATGAACAGGGTGTTATCCATCGGGATATTAAGGGTGCTAACATATTAACAACTAAAGAGGGTCTAGTCA AGCTTGCTGATTTTGGTGTGGCAACAAAGTTAACGGAGGCTGATGTTAATACTCATTCAGTTGTTGGAACGCCATATTGGATGGCCCCAGAGGTTATTGA AATGTCTGGGGTGTGTGCTGCTTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGTGTACCTCCTTATTATGATTTGCAGCCTATG CCGGCTCTTTTCCGTATTGTTCAGGATGAGCAACCTCCGATTCCTGATAGCCTGTCACCTGACATTACTGATTTTCTGCACCAATGCTTTAAGAAGGATG CTAGACAAAGGCCTGACGCTAAAACACTGCTGTCTCACCCCTGGATTCAAAACTGTAGACGTGCCCTGCAGTCATCTCTTCGTCACAGTGGAACATTAAA AAATATAGAGGAAGATGATTCAGCAGATGCAGAAGTTTCCGGTGGTGATAACAAGAGTGCTGGGGAAAGCTCTTTTGTGGAGAAAGAGGACTCTGCAAAA GAGTTTTCAAATGTGGTTGCTGATGGCAGCAAATCTCAAGAAGAGAATGCTTCAGATTCTAATTTGACACTGAAGGGAGGTGGTGTTCCATCAGATAAAG TTCCTACCGTAGCCATCAGTGAGAAGCCATTTCTAAAAACTGGTTCTGGCAAATTCTATTCAAATAGAGAAGTTCTGAGCTCCGAGCCAACTGGTGATCA CGAGATTTCAAATGCTAAAGACCTTCATGAAATCACGATGAATGGAGAAGTTGGGTCTCCACACTTAAGGAGGGTGGCTAAAAAACTGGAAGGAAAAGAA AGTAGCATCAATGATAGCAATAAATCATTTGCTTTTGGACCAAGAGGTCAAGATAATGGTTTCATAAAGGCAGTGAAGATACCACCTGCTATGGAAGGAA ATGAACTCAGTAGATTTAGTGACCCACCAGGAGATGCTTACCTAGATGATTTATTTCATCCATTAGATAAACAACCTGGGGAGTTTTTAGCCGAAGCTTC CACATCTACGTCCACTTCACATATGGTTAAAAGTAATACATCTATGAATGATGGTGGCAAAAGCGATCTTGCCAAAGAGTTGAGGGCTACAATTGCTCGA AAGCAATGGGAGAAGGAGAGTGAAATTGGGCAGGCAAACAGTGGCGGGAACCTTTTACATCGAGTGATGATTGGTGTTCTAAAAGATGATGTGATTGATA TAGATGGGTTGGTCTTTGATGAAAAACTTCCAGGAGAAAACCTTTTTCCTCTGCAGGCTGTTGAGTTCAGCAAATTGATTGGTTCATTAAAACCAGAGGA ATCAGAAGATGTGGTTGTATCTGCATGTCAGAAACTTATTGGTATATTTCACCAACGTCCAGAGCAGAAGATTGTTTTCGTTACCCAGCACGGCTTACTT CCTTTAACGGACTTGCTAGAAGTTCCTAAAGCACGCGTCATATGTTCTGTGCTTCAGCTTATAAATCAAATAATTAAAGACAACACTGATTTTCAAGAAA ATGCATGTCTTGTTGGATTAATTCCTGCAGTCATGAGCTTTGCAGTACCTGATCGTCCCCGTGAGATTCGTATGGAAGCAGCTTATTTTTTGCAGCAGCT TTGTCAGTCTAGTTCTTTGACATTACAGATGTTTATAGCTTGCCGTGGAATACCTGTTTTGGTTGGATTTCTTGAGGCTGATTATGCGAAGTATAGGGAA ATGGTTCATTTAGCTATTGATGGCATGTGGCAAGTATTTAAGCTTCAGCAGTCAACACCTAGAAATGATTTTTGTCGGATAGCTGCTAAGAATGGAATAC TCCTTAGGCTTATAAATACCCTTTATAGCCTAAATGAGGCAACTCGACTAGCTTCTATGTCTGTTGGGGGTGGATTTTTGGTTGATGGTTCAGCTCAGCG GCCACGTTCTGGTATCTTGGATCCCAAACATCCTTTTATCGTTCAGAATGAGGCGTTGTTATCTGCATTAGATCAGCAGGGTCTCCATAAAGTGAGGCGT GGATTACTTGATCATCAACTAGAACCTTCAAACGCTTCAACCTCCAATCCTCGAAGATCTGATGCTAATCACCTTGCCGATGCTGACAGGCCTCGATCTA GCAATGCAACAGCTGAAGTTCCAGCTGTAGAGAAGATTTCAAATCTAGCATCCAGAGAATCTTCAGTTGTTGCATTTAAAGAGAGAGACACTGTGGATCG TTGGAAAACAGATCCTTCTCGAGCAGATGTCGATCCCAGATTGCAGCGTATCAGTATTTCTGCTAACAGGAAATCAACAGATAGGCCTCCAAAATTGACA GAACTTGGATCAAATGGGTTATCGGTTACAGGAGCTACACAGCAAGATCAAGTTAGGCCTCTTCTTAGCTTGTTGGACAAAGAGCCCCCATCTGGACGAT TCTCTGGCCAGATTGAGTACGTGCGTCAGTTTTCAGGATTAGAAAGACATGAAAGTGTACTCCCTTTGTTACATGCCTCTGAGAAGAAAACAAATGGTGA ACTAGACTTTTTGATGGCAGAATTTGCAGATGTTTCTCAGCGTGGAAGAGAAAATGGAAATCATGACTCCAGTGCTAGAGTGTCTCACAAAGTTGCTCCC AAGAAATTAGGGACTGATGGAGCTGCTTCCACATCTGGGATTGTATCTCAGACAGCATCGGGTGTACTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAG GTAGTGCTACTTCATCTGGGTTACTTTCCCACATGGTTTCATCATTGAATGCAGATGTTGCAAGGGAGTACCTGGAAAAGGTGGCAGATCTTCTGCTTGA GTTTGCACAAGCAGACACAACAGTGAAATCGTACATGTGTAGCCAAAGCTTGCTTAGTCGTCTTTTCCAGATGTTTAATCGGGTGGAGCCTCCAATTCTG TTGAAGATACTGAAGTGCATTAATCATCTGTCAACTGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAAGCAATAAAATACTTGATTCCAAATCTAG AACTTAAAGAAGGATCTCTTGTTTCAGAGATACATCATGAGGTCTTGAATGCGCTGTTCAATTTATGCAAGATAAACAAGAGGAGACAAGAACAAGCAGC TGAAAATGGGATCATTCCCCATTTGATGCAATTCATTACATCAAACTCTAACTTGAAACAGTCTGCATTGCCTCTGCTGTGTGACATGGCTCATGCATCT CGCAATTCAAGGGAGCAGTTAAGGGCTCATGGTGGCTTGGATGTCTATTTGAACCTTCTTGAGGATCAGATTTGGTCTGTGACTGCGCTAGATTCTATTG CTGTTTGCTTAGCCCACGACAATGATAATAAGAAGGTTGAACAAGCATTGCTGAAAAAGGATGCAGTTCAGAAGCTTGTGAATTTCTTCCAATGCTGTCC TGAGCAGCATTTTGTACACATATTAGAGCCATTCTTGAAAATCATCACAAAATCTGCACGGATCAATACCACATTAGCTGTTAATGGATTAACGCCATTG CTTATTGCAAGGCTTGATCATCAGGATGCTATAGCTCGTCTTAATTTACTCAGGCTTATAAAGGCTGTTTATGAGCATCACCCACAACCCAAGAAATTGA TAGTGGAGAATGATTTACCAGAGAAACTTCAAAACTTAATAGGTGAACGGAGAGATGGACAAGTGTTGGTCAAACAGATGGCCACTTCATTACTTAAAGC TCTACACATAAACACTGTTTTGTGAATTCAGATTTTAATTTCTGAATGTATATAAGTTTCCCTTAGTTTAATTACTGTTTTGGTTGAACAAAAATAGTAT AAGGCTGTGGTGTATGGTGTGTGTGTCTTCACTTTTGGATAATGTTTTAGTTGCTGTCACAATTTGCTTTTATTTTAATTATCACGACTATTGGACAATT GTATTAACACTTCTAGAGTGCATGAAAATTGATACCAAAGTGGTGTTTTATTACTTATGATGCGTGAGAACAGCACATAGATAAATGGGGA BLAST |
Tissue | pods |
Gene name | LI_gene_194787; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_462994
Blastp | MAP3K epsilon protein kinase 1 from Arabidopsis with 71.16% of identity |
---|---|
Blastx | MAP3K epsilon protein kinase 1 from Arabidopsis with 71.16% of identity |
Eggnog | mitogen-activated protein kinase kinase kinase(ENOG410XQGS) |
Kegg | Link to kegg annotations (AT3G13530) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450937.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |