Ll_transcript_479133

• Id Trinity: TRINITY_DN52704_c1_g1_i8
• Name Transcript: Ll_transcript_479133
• Sequence: CAGGACAGTGTACTTTTCTCACTGTCTATGTTCTGTCTCTCACCGTGTCTTTCTCAATTTGTAAGGTTACACAGTTGGAGACACTGTTACTTCATTTTTA TAAAAATATTCACTTTTCACTTTATTTATTTATATTCATTCACAAACTGTTGAAGCCACATCATATATGATCATAACTTCACAAACTGGGTTCGGAAGAA GAAGAAAAAACCACTCTTTTCCGCATAAAAAAGAGGATATTATAATTTATAATCGATTTTAGTTCTGGAAATAACCATTGAGGGCAAGCCGATCATCTCT GTCAACAATGTCGGATGCATATGAAGACCAAGAGCCTCCTGTACAGCCAACTGTAAGATTTGCCCGAAGAACATCCTCGGGTCGCTATGTAAGTTACTCA AGGGATGATCTTGATAGCGAGCTCGAGAGTGGTGATTTCATGAATTACACGGTGCATATACCACCAACCCCTGATAACCAACCTATGGATCCATCAATTT CACAGAAAGTTGAGGAGATATATGTGTCCAATTCACTCTTCACAGGTGGGTTCAACAGTGTTACTCGAGCACATCTCATGGATAAGATAATAGAATCTGA AGCAAACCATCCACAGATAGCTGGTGCAAAAGGATCTTCGTGTGCTGTTCTTGGATGTGATTCTAAGGTGATGAGTGATGAACGTGGTGTGGATATTCTT CCATGTGAGTGTGATTTTAAGATATGTAGAGATTGTTACATAGATGCAATAAAAACAGGAGGTGGGATATGCCCGGGATGCAAGGAGCAATATAAGAACA CCGAACTAGATGAAGTGGCTGTGGATGATGTGCATTCCCTTTCACTTCCTCCACCAAGTGGAATGTCTAAAATGGAGAGAAGATTGTCTAAGATGAAGTC GACTAATAAATCGGCATTAGTGAGGAGCCAAACCGGAGACTTTGATCATAATAGGTGGCTTTTTGAAACAAAGGGTACCTACGGCTATGGCAATGCTCTA TGGCCAAAGGAAGGAGGTTTTGGAAACGGAAAAGGGGAAGAAAATGCTGAGCCAACTGAGTTTATGAGCAGGCCCTGGAGGCCCCTTACGCGGAAGCTGA AGATACCTGCAGCTATTCTGAGCCCATATCGGCTTATTATTTTTATTCGGTTGATTGTACTTGGACTTTTCCTGGCATGGAGGGTCCAGCACAAAAATAG TGATGCAATCTGGCTGTGGGGCATGTCTGTGGTTTGTGAGATCTGGTTTGCTTTTTCCTGGATTTTGGATCAACTTCCCAAACTATGCCCAGTGAACCGT TCCACCGATCTTAATATTCTGAAGGAGAAATTTGAAACACCAACTCTTAGCAATCCTACTGGAAAGTCTGATCTTCCAGGCATAGATATCTTTGTCTCCA CGGCTGATCCTGAGAAAGAGCCACCTCTTGTCACTGCCAACACTATCTTGTCTATTTTAGCTGCTGATTACCCAGTTGAGAAGCTGTCCTGCTATGTTTC TGATGACGGAGGCGCGCTTCTAACTTTTGAGGCAATGGCTGAAGCTGCTAGCTTTGCTAATGAGTGGGTTCCCTTCTGCCGTAAACATGATATAGAGCCG AGGAATCCTGAATCATATTTCAACTTAAAGAGAGACCCTTATAAAAACAAAGTGAAGCCTGATTTTGTCAAAGATCGTAGACGGTTGAAGCGTGAGTATG ACGAGTTCAAGGTCAGGATTAATGGTCTGCCCGATTCTATCCGTCGCCGATCAGATGCCTATCATGCAAGAGAGGAAATCAAGGCCATGAAACTTCAGAG ACAAACCAGGGGAGATGAACCTATAGAAACTGTAAAGATTCCCAAAGCAACATGGATGGTTGATGGAACTCATTGGCCAGGGACTTGGTTAAGTCCTACA TCTGAGCACTCTAAGGGTGACCACGCTGGTATAATTCAGGTGATGTTGAAACCTCCCAGCGATGAACCACTTCTCGGGGGTTCTGATGAAGCTAAGCTTA TCGACCTGACAGATATTGATATCCGACTTCCCCTTCTTGTTTATGTTTCTCGGGAGAAGCGTCCAGGGTATGATCATAACAAAAAAGCAGGGGCTATGAA TGCCTTGGTCCGTGCCTCCGCTATAATGTCTAATGGTCCTTTTATACTCAATCTTGATTGTGATCACTATATCTACAACTCGAAGGCAATGAGGGAAGGC ATGTGCTTTATGATGGATCGCGGAGGTGATCGCCTATGTTATGTCCAGTTCCCACAGAGGTTTGAGGGGATCGATCCCTCTGATAGATATGCTAATCATA ACACTGTATTCTTTGATGTGAATATGCGAGCCCTTGATGGACTGCAAGGGCCGTTCTATGTGGGAACCGGTTGCCTTTTTAGAAGGGTTGCACTTTATGG TTTTGACCCTCCTCGCTCTAAAGAGCACCACTCAGGTTTCTGTTCTTGCTGCTCTGGTCGTAAGAAGAAGCATGCATCATTAGCAAGCACCCCGGAAGAG AATAGAGCACTAAGGATGGGTGATGATGAAGAAGAGGAAATGGACCTATCGTCCTTCCCTAAGAAGTTTGGAAACTCAACTATTCTCATTGAGTCAATCC CCGTGGCAGAGTTCCAAGGCCGGCCACTTGCTGATCACCCCGTAGTGAAAAATGGACGCCCACCTGGTGCTCTCACCTTACCCCGTGATCTTCTTGATGC ATCAACCGTAGCAGAGGCTATCAGTGTCATCTCTTGTTGGTATGAGGACAAGACTGAGTGGGGGCAACGTGTTGGATGGATCTATGGATCCGTTACGGAG GATGTGGTCACTGGATATAGGATGCACAATAGGGGGTGGAAATCTGTGTACTGTGTGACAAAGCGTGATGCCTTCCGTGGAACTGCTCCTATCAATCTTA CTGATAGGTTACACCAGGTTCTTCGATGGGCTACAGGCTCGGTGGAAATATTCTTCTCTCGAAACAATGCCCTTCTGGCTAGCCCAAGAATGAAACTTCT TCAAAGAATTGCATACCTCAATGTCGGAATCTACCCCTTCACTTCCATCTTTCTTATTGTATACTGCTTCCTTCCTGCACTGTCACTCTTCTCCGGCCAA TTCATAGTTCAAACACTCAATGTCACATTTCTCTCTTATCTCTTAGGCATCACAGTCACTCTGTGCATACTTGCAGTGCTTGAAATCAAGTGGTCTGGCA TTGAGCTAGAAGAATGGTGGAGAAATGAGCAGTTTTGGTTGATCGGAGGGACAAGCGCTCATCTAGCTGCGGTGCTTCAAGGTTTGCTCAAAGTCGTAGC TGGTATCGAAATCTCATTCACCTTGACTTCAAAATCTGGTGGTGATGATGTAGATGACGAGTTTGCCGATCTATATATTGTGAAATGGACATCACTTATG ATACCGCCAATCACAATCATGATGGTTAACTTGATAGCAATAGCCGTTGGAGTTAGCAGAACCATATACAGCGTTATACCGCAGTGGAGCCGTTTGCTCG GTGGAGTTTTCTTCAGTTTTTGGGTATTGACTCATCTCTATCCTTTTGCAAAAGGTTTGATGGGAAGAAGAGGAAGGACACCTACCATTGTTTTTGTATG GTCAGGCCTCATTGCAATTACAATCTCACTTCTCTGGGTAGCAATCAATCCTCCTGCTGGTACTAACCAAATTGGTGGTTCCTTTCAGTTCCCGTGATCA TCATCTCGATACCATCTCGATATATTCGTCAACTTTTACATTATTATTACGAGATTCGTGAACCTTTATGTGATGATATGCATCGTTAACTAGAGAACCT GGCAACTATGACCATCATATCTCATTCCTTTTGCCATGAATATGTCACCAGTTTTTATAATTTGTTTCAAAAAGTTTTACGCCTCTTAATTTAGCAACTT AATGGGCTTAAATTATGTTGTTTATTTTGCTTATGAATTTTGTTTTAGAATTTGAATCTAGAAATGAGATAATTTTTTTACCTCATTGTAAGAGTAAAAA TATTATTATATTTGTATATAAAGGATACAAATCATAAAGCTATTTTTTCTTTTACTTTCTGTATTGTTCTCTCTGGTAGCGGGAGGATCTTCACCTAATG TTTGAACGTTATTC
• Tissue: pods
• Gene name: LI_gene_194891;
• Additional information: details;

Expression of Ll_transcript_479133

FPKM

• PAB: 4.4
• PNAB: 1.1
• PS1: 5
• PS2: 0.2
• PS3: 1
• PW1: 5.5
• PW2: 5.8
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479133

• Blastp: Cellulose synthase-like protein D3 from Arabidopsis with 83.52% of identity
• Blastx: Cellulose synthase-like protein D3 from Arabidopsis with 83.2% of identity
• Eggnog: Glycosyl transferase, family 2(COG1215)
• Kegg: Link to kegg annotations (AT3G03050)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444591.1)
• Pfam: RING/Ubox like zinc-binding domain (PF14570.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;