| Id Trinity | TRINITY_DN52712_c3_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_481550 |
| Sequence | ATGGGCATGTTGCAAACCTATATAAGATACATATTGTAGTCATTTGTGACACAAGAAGAATATATTTATTTACATCTACATTTAGATTTTCATTTTCTCA TATAATTTAATCTACACACTCGATATTTAGATTTTCTTTTCATCTATACCTCTTTCAAACGCATATTATATAGTGTATCTTAGTTGCCTCCACCAACTGC CATGGCGGCCATCGGAGCATCTCTAAGTCCCGCCGCTTCTTTTCCCGTTTACAGCTGCCAAGAACCGTCGCAGACAGTTCTGAAATTAAAGGCAAAAGGG ATTCCTATCATGCCTGCACGTTTCGCATTTTCCGTTGACCGAGTTCCGGAGACAAGTATGACGGCGATACTGCCGAATAACGGAATTCCATCGGTGAAGG TGAACGGAGAAGAAGGTACGTTGGCAGAGAAAGTGAAGCGTAGTGAGAATAAGAAAGATGAAGAGGAAGAGGAGCTGAATCGGAGAAGCGGTTGGAGGAG TTACGTGGAACAGTCGAAGGAGATTGCTAAACCGGACGGTGGACCGCCGCGGTGGTTTTCGCCGTTGGAGAGCGGTTCGCGGTTGGATAAATCTCCTCTG CTGCTGTTTTTGCCGGGGATTGATGGTGTGGGACTTGGACTTACTTTGCATCATCAGAAATTGGGAAGTATTTTTGATGTCTGGTGCTTGCATATTCCAG TTGCGGACCGAACACCATTCACAGAATTTGTGAAAATAGTTGAGAAAACAGTTAGATCAGAACATCAACGGTTACCAAATAGACCCATATATCTTGTTGG AGAATCTCTAGGAGGATGCCTCGCGATGGCCGTTGCAGCCCATATCCCTGACATTGATGTTGTACTAATTTTGGCAAACCCAGAAAGTGAGAGTTGAACT CGATAATTTCCAGTAGCAATGATGAATAAAAGAAAGCTTTGAGTGTAGCTACCACAAGTGAGCGAGTGAATTCAAGACAATGTGGAAAGATGTCACACAC TCAGTAGAAATTAAAATCTACTTCATTTGGCAGATCACAGTTGCAACTTCTAACACCATTAATGGAAGCTATGCATGGTCCACTCTCTCTTTTCCCACCA GAAATTCTCAGTTCGATATCAGGTGACCCTTTGAAGCTGTTGGATAATTTGGTGAGAGGATTTCCTTTGCAAAATACAGCTAAAGAGCTATTGGAGGACT TCATTACTTTCTCAGGATCTCTCCCTGTTCTTGCTAATATATTGCCAATAGAAACACTTCAGTGGAAACTAAAGCTTCTTAAGTCAGCTTCTGCTTATGT CAATTCACGCCTTTATGCTATCAAAGCTCAAACTTTGATACTTTGCAGTGGAAATGATCAGTTACTACCTAGTCAGCAAGAAGGTGAAAGACTACGTCAG TTACTTCCGAAATGCGAGCTTCGTAAATTTCAAGGCAGTGGACATTTCCTATTTTTGGAAGGTAGCTTTGACCTGGTAACAGTCATCAAGCGTGCTTCTT TCTACCGTCGTGGCAAGTATCATGACTATGTATCAGATTTTTTACCACCAACAATCAATGAAGCCAAAGAAGAAATAAAAGCAACTAGTTTGATTAACAC TCTTACAAGTCCTGTAATGCTCTCAACTTTGGAGGATGGAACAGTTGTAAAGGGCCTTGCTGGAATTCCTATAGAGGGGCCTGTTCTGTTTGTTGGTTAC CACATGATGCTTGGACTTGACTTAGTTCCCTTGGTCAGTCGATTTTTTATGGAAAGAAATATCCTTGTTCGAGGGTTAGCACATCCAATGCTATTTATCA GAAAACCAGGAGGACTTTTGCCAGACGTGTCTGGATTTGATGCACCAAGACTTATGGGTGCTGTTCCTGTAGGACCAACAGCCCTCTTCAAACTTTTGTC TTCCAAATCTCATATACTGTTATTTCCGGGAGGTATGCGTGAGGCTCTTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_194950; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_481550
| Blastp | Acyltransferase-like protein At3g26840, chloroplastic from Arabidopsis with 46.28% of identity |
|---|---|
| Blastx | Acyltransferase-like protein At3g26840, chloroplastic from Arabidopsis with 46.13% of identity |
| Eggnog | Acyltransferase(COG0204) |
| Kegg | Link to kegg annotations (AT3G26840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437420.1) |
| Pfam | alpha/beta hydrolase fold (PF00561.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |