Ll_transcript_479847

Id TrinityTRINITY_DN52761_c3_g3_i1
Name TranscriptLl_transcript_479847
SequenceAATAAGGATGATATTATGAATAAAGACTATAGAGATTTGGATGAAACAATGGAATGGGATGCTGATGAAACTTACAACAAGAATTTTTCTCCAGGGTTTG AGGAACGAAAATACAAGAGACAGAGTCAATCCCCAAAAAATCGTCGGAGCATGTCTGGCAGGAGTAGTCGGAGCAGGAGCCCTCCCCATGGTTTTAGGCG GGATTCAGGATTCAATGATAAAAATAGAACGAGAGCTGGAGGATTGACACAACCATGTAGAGAATTTGCTGCCGGTAAATGTAGAAGAGGTAGCCTTTGC CATTTTCTTCACCATGATAATCAAAATTACGAGGACAGTTGGGAAAGTAAGCACAGGGAAGATGGTGCTCCCAGATATTCTGCTTCCCATGATAGTAGAG ACCATTCTCATAGGAGTGGTAGATCTAATGATGGATACAGTAAAGGTTCTGTGGATGAATCAACTAGAGAAAGGGAAAATGATAGAAGACGGAGAGATTA TTCTTTTGATCAGGGTGGCGGGCATGGGCCAAACCGTAGCGGTCTTATTTGCAAATTTTTTGCGAATGGAAACTGCCGCAATGGTAAATCTTGTAGATTT TCTCATGATAAGCAAACATATGAGAGCCCTAATAGAAGATCAAGGGATGATACATGGGGGAGCAATCCGGGTGGAGATCATCAGACATTGGATAGACCAA AATTGTCTGATTCAGTTAGTCCTACTAGAAGACGAAGAGATGATAGATGGGGTTCAGATGGCAATATGGTAGAGAATGACAACCCAAAGCAGAATGCTGC AGTAACTGTGTCTGATACAGCAAAGCTGGTTGAGGACAAATGTGGAAATATAGGAGCCATCGATCCTGGATTCTCTGCTTGGCCTACGAAGGATGGATGG GGTCATGGTTTAGATAATAACAGAGTGCATGGTGAACCAACATTTTCAAGTAATAAGAAGGAAAATGATCACCAGGTGGCAGAAAATGCTGGTTCCAACA TGCATGTTTCCCAGCCAACAGGTACAAGCAATTGGTCTGGTAATGAAATTTCTCTTGATTGGAATTACAGGGTGGGATCTTCTAGTCATATTCAAGAAGA GCATGAACAGAATAAGCATGGCATAGCCCAGGATGGTACATATATAGCCACTGAACATGAAGGAACACAAGTTCCAGGGAAAGGCTTTAATCAGAATGCA CATAATGTAAATCCTTTGCATTCTTCAAGCGGTCATGGAGTCAGACAAAGTCAAGTGACTGTTCCCATTCTTCCTTCAAGAGGAGTTGTTACTGATATTC TTCCAGTGCAAGACTTTAATCAGAATGTGCAGAATATAAATCCTTTTCAACCTTCAAGTGGCCATGCAGTTGGACAAAGTCAAGTGGCTGTTTCTGGTCT TCCTTCAAGAGGAGTTGTGGAAAGTATGCATACCCAACAAGTTTCTACTGATGTTCTTCCAGGGCAAGGATTTAATCAGAATGAACAGAACATAAATCCT TTGCATTCTTCAAGTGGCCATGAAGTTGGACAAAGTCGAGCTGATCTTCCCATTCTTCCTTCAAGAGGAATTGTTGAAAGTATGCATGGCCAAGAAGTCT CTGCTGAGAAGAAGTACACAGTTGAACCAAATTTCACAGATGCAGGCAATTCACAAGTTAGTTCAGGAAACCCTCAAACTCAGAACAAGGTAAGCAATGA ACAGCTTGCTCAGCTGAGCAATCTCTCAGCCTCTCTAGCTCATATCCTTGGATCAGGTCAGCAATTACCACAGCTTTATGCTGCTTTAAATTCTCATGAT GCAAAGGACAGTCCCTCACTAGCCAAAACTGAAGTGCCAGCTATGCCTGTTCCCAACACATTCATTAAGCCAGACCCTGTCATTGGATTCACGAAGCAGT ATGATCCAGTGTGTGACAGTATTGAAACAAAAAATGCTGTTGCAAGTGGGTCTACCCTGGCTTTGTCTCTAAGTAAAAAAAATGCAGAAGCTAAGGAGAA GAATGAAGTGGTAGTTGTGGAAAGGCAAAGTTCTCCAAGTGGTCATAAAAATACAAAAGAGAATGGTCCTTCAGAAAACATGGACCAAAATGGTGGACCT GAAGACGCCAAGAAAACAAAGGATGCAAAGGGGATCCGTGCATTTAAATTTGCATTGGTTGAGTTTGTTAAGGAACTTCTGAAACCAGCATGGAAAGAAG GCCAAATTAACAAAGAAGACTACAAAGCAATTGTGAAGAAAGTCGTTGATAAAGTAACCAGTACCATGCAGGGCGCCAATATTCCCCAGACGCAAGAGAA AATTGACCACTATTTGTCATTCTCAAAATCAAAACTTAGCAAACTTGTACAGGTCAGTGGTGGTCACTTGCACAATGTTACATGTTTGAAGGATTTCACC TTGCTCCCCATTTCACTTTCAGTTTTATAGATGAATGTGAACATAGACGAACTTCCAGAAACCATTTAATTTTTTAAAGGGCTTAATTTGAATTTTGAAA GAGCTGATGGAAAGTTGCCCAAAAATGATGATTAAGTTTTAGCTAAGAAAATATGTAATTATTCAAGATTTATATTTGAAACTAAATTTCTTAATTAAAT ACACTGTCTAAAGCTTAAGACACTTCTGGGA BLAST
Tissuepods
Gene nameLI_gene_195368; 
Additional informationdetails; 

Expression of Ll_transcript_479847

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_479847
BlastpZinc finger CCCH domain-containing protein 38 from Arabidopsis with 36.84% of identity
BlastxZinc finger CCCH domain-containing protein 38 from Arabidopsis with 73.56% of identity
Eggnogzinc finger CCCH domain-containing protein(ENOG410ZKTI)
KeggLink to kegg annotations (AT3G18640)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019434524.1)
PfamZinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;