Ll_transcript_479822

Id TrinityTRINITY_DN52792_c5_g4_i4
Name TranscriptLl_transcript_479822
SequenceCCGGAGGGTTAGGAGATGTTCTTGGAGGTCTGCCACCAGTTTTGGCAGCTAATGGACATCGCGTTATGACCATTGCTCCATGTTACGACCAGTACAAAGA TGCATGGGATACAAGTGTTACAGTTGAGGTAAAAGTAGGAAATAGAACAGAAAAAGTTGGCTTCTTCCATTGCTATAAAAGAGGAGTTGATCGCGTCTTT GTGGATCATCCACTATTCCTTGAAAAGGTTGGAATGTTTCTTTATTTTTCAGCTATAAATTTAGTGTTTTGATTTCAGAAGCTTAGTAATGGCTGAACTT CAAGGTCTGGGGGAAAAGTGGGACCAAACTTTATGGACCTTCTGCTGGAGATGATTACGAAGATAATCAACTACGTTTCAGCCTGTTCTGTCAGGCAGCT TTGCTTGCACCAAGGGTTCTGAATCTTAAGGAAAGTAAATATTTCTCAGGACCATATGGCGAAGATGTTATTTTCATTGCCAATGATTGGCACACTGCTC TTCTCCCATGCTATTTGAAAACTTTGTACCAACCATTGGGCATCTTTAAGAATGCTCGAGTTGTATTTTGTATCCACAACATTGCTTACCAAGGAAGATT TCCATTCGCTGACTTTTCACTTCTCAATCTCCCAGACCAATTTAAAAGTTCCTTTGATTTCATTGATGGGCATGTTAAACCGGTGATTGGAAGGAAAATC AATTGGATGAAAGCTGGAATTGTGGAATCACACCAAGTGTTAACTGTCAGTCCATACTATGCTGAAGAACTAGTGTCAGGCCCGGATAAAGGGGTTGAGT TGGACAACATTCTTCGCAAAACTGGTATTATTGGAATTGTGAATGGCATGGATGTTCAAGAGTGGAATCCATCAACTGATAAATACATAACTGTCAAATA CACTGCTACAACTGTATTGGAAGGAAAGGCTCTTTTGAAAGAAGCCCTTCAAGCAGAAGTTGGATTGCCTGTAGACAGAAATATTCCTATCATATGTTTC ATTGGTAGGCTTGAAGAGCAAAAAGGTTCTGATATTCTCGTAGAAGCCATTCGCCAATTTATTAAGGAGAATGTTCAAATAGTAGCCCTTGGAACAGGGA AAAAACAAATGGAAAAGCAGCTTCATCAGCTTGAAGTATCATACCCTGACAAGGCCAGAGGAGTGGCAAAATTTAATGTTCCCCTAGCTCATATGATTAT CGCCGGAGCTGATTTTATATTGATTCCTAGCAGATTTGAGCCTTGTGGTCTTATCCAATTACAAGCTATGCGCTATGGAACTGTACC BLAST
Tissuepods
Gene nameLI_gene_195653; 
Additional informationdetails; 

Expression of Ll_transcript_479822

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_479822
BlastpGranule-bound starch synthase 1, chloroplastic/amyloplastic from Manihot with 77.72% of identity
BlastxGranule-bound starch synthase 1, chloroplastic/amyloplastic from Manihot with 78.05% of identity
Eggnog-
Kegg-
CantataDBLink to cantataDB annotations (CNT0001477)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019454627.1)
PfamStarch synthase catalytic domain (PF08323.10)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;