Ll_transcript_480791

• Id Trinity: TRINITY_DN52796_c2_g4_i1
• Name Transcript: Ll_transcript_480791
• Sequence: CATGGTTAAACCTCTCCCCTTAACTTCCTCACGTGACCGCGCTTCTTCTCCGCCTCTCTCAAATAGAAAACGATGGAGGGTTTAAGCAACGCTACTTTCA TGGACTCAACGGAGTTAAAGATAACGGAACTACTGAAGGAGGTTCAAGTTCACCATTCACCTCAATTCATTAAGCTTGTTGATGACACAGTCTCCGCCGT CAAATCATCCATTGAAAAAATCCCCGATGATTTTAAGGTAACTGCGGAACTAGCACCGAAATTTGTTAGCGACATTGGTGCAGATAAGGTGGAGTTTAAG TTTAAGAAGCCATCGTTTATTAAAATTGGTGGCAGTTACTCTATACAGACTCTTGCAAGGCCTCAAGTTAACATTGACCTTATTGTTAGGCTACCGAAGG AGTGTTTCCATGAGAAGGATTATTTAAATTATAGGTATCATGCCAAGAGGTGCCTTTATCTCTGCTTGATGAAGAAGTACTTGGAGAAATCTCCATCTAT TGGTAAGGTTGAATGGTCTACCCTACAGAATGAAGCTAGAAAGCCCTTACTCATTGTTTATCCAGCTGCAAAGCTTGCTGCAGTTCCTGATGTGTCTGTG AGAATTATTCCGTCAGCAACGTCTCTATTTAGCATATCGAAGTTGAACCTGAAGCGTAATAACATTCATGATTCGAATCATGGGGCTGCTCTTCAGGCTA CACCAAAGTACAATTCTAGTATTCTGGAAGACATGTTTTTAGAGGATATAGAAATCATCCACAGATTTTTTATTGGATGGAAGGAACTAAGAGACGCTTT AGTCTTGCTTAAGGTTTGGGCTCGTCAGAGAAGTTCAATACACGTTCATGATTGCCTAAATGGGTTTTTGATTTCTGTCATACTGGCATATCTTGCTTCT AGGCAACAAGTTAATACTTCAATGAAGGCAGCTGAGATATTTCGCTTTACCTTGAACTTCATTGCCACTTCAGTGTCATGGAGACGAGGGCTCTACTTTC CAAAAGAAGGCCAGAGTAATATTACTAAAGAGCAAAGGCTGCAGCTTAAAGAGTCATTTCCTGTTGTCATATGCCATCCATCTGGAGGGTTCAATTTGGC TTTCCGAATGTCTAAGATTGGTTTTACTCAGCTTCAAGAAGAGGCTGCTATGACACTGAAGTGCATTGAAAAGTGTAGAGATGGTGGATTTGAGGAAGTT TTTATGACCAAGATAGACTTTGCTGTTAAATATGACTATTGCATGAGAATAAATTTGAAGGGAAAGAAGGAGGTATATTCTTCTGTATTTTGTTCGGATA ATGAGTGTTGGAGATCATTTGAGGAGAAAATACATGGCATTTTAGCTAAAGGGTTGAACGATAGAGTAAAGTCCATTCGAGTTACATGGAGAAATACACA ATGCCAATGGAGTGTAGATGATGGCTTGTCAGTACTTGATAAAGAGCCATTGTTCATAGGAATTTCGGTCAGTAATTTGGAGAAGGCATTTAGGATGGTG GACATTGGCCCAAGTGCAGAAAGTAAAGATGAGGCTCTTCAATTTCGAAAATTTTGGGGAGAAAAAGCAGAACTTAGAAGATTTAAGGACGGCAGAATTG CAGAAAGCACAGTATGGGAAACTGCGCAATGGACAAGGCATCTTATCTTGAAAAATATAGCTGAACATGTGCTTTGTCGACATCTTTCTCTATCCAAGGA AAATATTGTAATTACTGTGGATCAACTTGATTTCTCTTTGCTTCATGGCGCTGGAGATCCTATATCATACTCTGGAAGTTTGCTAGGGGCATTTGATGTT TTATCAAAGCGCTTGCGTCTTATTGAAGACCTCCCTTTGAAGGTTTCTAGTGTACAGCCTTTAGACTCTGCTTTCAGGCTTACATCGGTCTTCCCTCCTG AACCTCACCTTTTAGCTAATGAAAAAATTGAATCTCCAAGACTGAATAAGTTTGTTCCATCATGCATTCAGCCCCTGGAAGTTATGATTCAGCTGGAAGG TTCAGGGAATTGGCCTATGGATGAAATTGCCATTGAAAAAACAAAATCTAGTTTCCTTATTCAAATTGGAGAGAGTCTTCAAAAGATGTGGGGAGTGGCA TGTACTGCCACTGAGAATGATGTGGACGTGCTAATGTCTGGATATGCCTTTCGTCTTAAAATTTTGCATGAGAGGGGCCTTAGTTTGATCAACAAGGAAA TTGGGAGTGATCAAGCGAAGCGGGTTCATTCTACTGACAAGAAACTTTTTATTCATAGTCAACATGCTAGTATGATCAATGGATTACAAAGTCGTTATCC AATATATGCACCAGTAGTTAGACTTGCAAAACGATGGGTTGCTTCACATCTCTTATCGGCTTGCTTGGTAGAGGAGGCTGTTGAGCTATTGGTAGCACAT CTCTTTCTAAATCCTTTGCCATTTGATGCTCCTTGCTCGCGGATAACTGGGTTTTTAAGGTTCTTGAAGTTACTCTCCCAGTACGATTGGGCTTTTTCTC CACTGGTTGTTGACATTAATAATGATTTGAGCCAAAGTGATGTGAAAGAAGTAAATGATAACTTTTTGCAAAGAAAAAAGGGTCAGGGAGAGATTATAGG GCCAGTGATGTTCTTAGCTACAGTTTATGATAAGTCATCTGAGGCTTGGACTGGCTTATCACCAAATGCACTGGAACTTAAAAGGTTAGTTGCATATGCT AGAAGCAGTGCAGATTTGTTGACCAAACTCACATTTCAGGAAGAGATTGGTCCATACAGATGGGAGTGCCTCTTTCGAACTCCTTTGAACAATTATGATG CAGTAATTCTTCTCAACGGTGACAAACTTCCATATCCCCGAAGACTTCTCTTCCCATCCAACGTTGACCAAGGAAAACAAGTTGCTATAGGACATGCTAG CAAGTCTTTCCAGCCCTATCTGTTGCCTAGAGATTTGAAGGGCCGTCCAGAGGAACTTAAGAATAAGTTGCTGGTAGACTTCAATCCATCAAGGTGCTTC ATCGGAGATTTAGAGAAAGAGTTCCCCACCACATTCAAGGTATGGCATGATTTCCTGGGAGGTGATGTTATGGGACTAACGTGGGGAGAGTCTTATTCTT CAAAGAAGCGGAAGCAAGAGGAAGTAGTTGTGGAAGGGCATGATCCTTGCAAGGTGTTAAAGGCAGTGGGCGATGTTGGGAAAGGGTTTGTTAGGAGTAT ATACTTTCTCAAGCCCCCAAGGATCACAAATTAATACTGTTTCGATCATCAAGATCAGAGATTTTTGTCTTAGTCACTAGCTAATTGGATTATTAGAAAA TTAACTCGAATTGTCCTCGAGAAAGCAGTTGAGTATAGGAACGATGTGATAGAGCGCGATCATCCTACTTTGTTAAGCTTAAAGAAGAAATTTTGTAGAT TGGTCTATGTATTTTCTTTTATGCCACAGCTAGGCAGCCTAAATAGGATGTAGAAAGAGTTCCTGATTCTTGTGGATGAGGTTGATGTAATATTGGATAC CGTGTTTACTTTTTATGATTTCTTATTTCTGTATACTAGTTTTTCAAAGGAATGAAATGCTGTGTTCGAGTTATGATCTAGATACTAAATAATATTTAAC
• Tissue: pods
• Gene name: LI_gene_195704;
• Additional information: details;

Expression of Ll_transcript_480791

FPKM

• PAB: 0.8
• PNAB: 8.5
• PS1: 6.2
• PS2: 5.3
• PS3: 6.9
• PW1: 4.4
• PW2: 3.7
• PW3: 3.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480791

• Blastp: Nucleolar protein 6 from Xenopus with 29.83% of identity
• Blastx: Nucleolar protein 6 from Xenopus with 29.83% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (431889)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423403.1)
• Pfam: Nrap protein domain 1 (PF03813.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;