Ll_transcript_493731

• Id Trinity: TRINITY_DN52847_c3_g1_i16
• Name Transcript: Ll_transcript_493731
• Sequence: GTAACACTTACATAACGTTATCTCCACCAGTGGCATTTTCGTAATCTCATCTTAAATTGCAGAAAACACCACTCTCTTTCTTCCTCATAGTATTTACGCA GTGCCATCTTACAAATACAAAAAACCTTTCTCTCTCATTGAGCTCGATCTCTCTTTGGGCTCGTTGAATTTGGATTCTGATCTGCGACGATTGATCTCGA ATTCTCGATCAACTCTAGTTCATTCTTCAATCTGCTCCAATGCCTCTCAGACTCGAAATCAAGCGAAAGCTTGCACAAAGATCAGAAAGAGTAAAATCTG TGGATCTGCATCCAACAGAGCCATGGATTCTCGCAAGTTTGTACTCAGGGACTGTCTGTATCTGGAACTACCAATCTCAGATCATGGCCAAATCTTTTGA GGTTACAGAGTTGCCAGTTAGGTCAGCCAAGTTTGTTGCGCGCAAACAGTGGGTTGTTGCTGGAGCAGATGATATGTTTATTCGTGTATATAATTACAAC ACAATGGATAAAGTCAAAGTATTTGAGGCACATACAGATTACATTAGGTGTGTGGCAGTTCATCCTACCCTTCCTTACGTGCTCTCGTCGTCTGATGATA TGCTCATAAAGCTTTGGGATTGGGAAAAAGGCTGGGTTTGTACCCAGATATTTGAGGGACATTCTCATTATGTCATGCAAGTGACATTCAATCCTAAAGA CACCAACACCTTTGCCAGTGCATCTCTTGATCGCACCATAAAGATTTGGAACCTTGGCTCTGCTGACCCCAATTTTACATTGGATGCTCATCAGAAAGGA GTAAATTGTGTGGATTACTTCACAGGTGGTGACAAACCTTATCTAATTACTGGTTCTGATGACCACACTGCCAAGGTATGGGATTATCAGACCAAAAGTT GTGTCCAGACTCTAGAAGGTCACACACACAATGTGTCTGCTGTATGTTTTCATCCCGAACTTCCTATAATCATTACTGGTTCTGAGGATGGCACAGTACG CATATGGCACTCAACAACTTATAGGCTTGAGAATACACTGAACTACAGTCTTGAAAGAGTATGGGCTATTGGATACTTGAAGAGTTCACGTCGGGTTGTG ATTGGCTATGACGAAGGAACAATTATGGTCAAACTTGGTCGAGAAGTACCCGTGGCTAGCATGGACAATAGTGGGAAAATTATTTGGGCTAAGCATAATG AAATTCAGACTGTCAATATAAAGAGTGTAGGAGTAGATGTGGAGATTGCTGATGGAGAAAGATTACCTTTGGCTGTTAAGGAGTTGGGCAATTGTGATCT CTACCCACAAAATTTAAAGCACAACCCCAATGGAAGATTTGTTGTTGTATGTGGAGATGGTGAGTATATTATATACACTGCATTGGCATGGAGAAATAGG TCATTTGGTTCGGCACTGGAATTTGTTTGGTCTCCGGATGGAGAATATGCTATCAGAGAAAGTACATCAAAGATTAAAATTTTCAGCAAAAATTTCCAGG AAAAGAGGAGTATCCGACCAACATTTTCAGCTGAACGAATATTCGGTGGCACTTTGCTTGCGATGTGCTCAAATGATTTCATCTGTTTTTATGATTGGGC TGAATGCAGGTTGATCTATCGCATTGATGTCAATGTGAAGAACCTCTACTGGGCTGATAGTGGTGATCTTGTAACAATCGCAAGTGATACATCATTCTAC ATCCTGAAGTATAATCGTGATGTTGTTGCATCACATTTAGATAGTGGAAGACCCGTAGATGAGGAGGGTGTTGAAGATGCTTTTGAGCTCCTTCATGAAA TGAATGAACGTGTCAGGACAGGCATCTGGGTAGGGGATTGTTTTATCTACAACAATTCCTCTTGGAGACTTAATTACTGTGTTGGTGGTGAGGTAACTAC AATGTTTCATTTGGACCGCCCTATGTACTTGTTGGGATATCTTGCGAACCAAAGTCGGGTTTATTTAATTGACAAAGAGTTCAATGTTATTGGATACACA CTGCTTTTAAGCTTGATTGAATACAAGACACTTGTGATGCGTGGTGATTTAGAAAGGGCAAATGAAATTCTGCCATCAATTCCTAAAGAGCATCACAACA GTGTGGCTCGTTTCCTGGAATCGCGAGGGATGATAGAGGAGGCTCTTGAAGTAGCAAC
• Tissue: pods
• Gene name: LI_gene_196236;
• Additional information: details;

Expression of Ll_transcript_493731

FPKM

• PAB: 1.5
• PNAB: 20
• PS1: 14.1
• PS2: 10.5
• PS3: 12.2
• PW1: 13.3
• PW2: 11.4
• PW3: 7.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_493731

• Blastp: Coatomer subunit beta'-2 from Arabidopsis with 91.39% of identity
• Blastx: Coatomer subunit beta'-2 from Arabidopsis with 91.39% of identity
• Eggnog: coatomer protein complex, subunit beta 2 (beta prime)(ENOG410XNNY)
• Kegg: Link to kegg annotations (AT1G52360)
• CantataDB: Link to cantataDB annotations (CNT0002993)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436410.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;