| Id Trinity | TRINITY_DN8118_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_427916 |
| Sequence | TCTCACCTCATCTAAACTCTCCCGGATTTTGGTATTGGATTGGGTTGAAACTTTGAAACCAACGCATGGACTCCATTATTTCCATTTCATCATCACTTCC TCCACTTCGTGCACTTGCTTCATCTCCATCTACCTCTTCCTCTCTTCCTTTTTCTCTCTTTCACTTTTCCGCTACCCTCTCTTCTCCAACTATCTTCTCC ACTAAAACATCAAAACTCAGCTTCCGGAATAGTTCTCATGCACTTCCTCAATTCACCGTTAGATGCGGTTCTGGTGTGGCTGAGATCGATGAAACCCAGT TCAAAGATACTGTCTTGAACGCTAATCGTCCCGTTCTTGTCGAATTCGTCGCTAATTGGTGTGGCCCTTGCCGACTCATTTCTCCCGCTATCCAATCCCT CGCTCAGGTTTCTCTCTCTCGCTTTTTGGATTAATTGATTAATAGTTGTATAAATAACTAGGTTTCATCTTACATCATTTATGTTAATGCACTCTCATTC TTTGCAATTGCCACAATTGGGAAGTTTTGTTTCTGTTGTTTCGAATGGATTCACAACTAAAAACCCTATTCCATCCCATATCATCTAATTTGGGAACAAG GTCGAGTAGTTGTTTTTACTCGTATTTTTTAATGATAAAGATATGATTTTATTATAAACAAAAGGATAAAACTATGATTACGACTTGTTATTTGTATGTT ATTGTGTGATACTTGTCTCTCTATTATTGGAGTAGAATATAATGTAATTATACACCATTCTGCTCCATGTAATCGCATTCCATCCTTTACCACCAATCCA AATAAAGCCTAAATATCAAAATAAGCCATACCTTTCCCATAAAAGCTAGTAGTTTATATAGAGAGAGGGACAGAGAGATATCCACACGCATATAGGCACA TACTTGAAGCTGAGATTACTTGCATTAATGTTGGAAATAGTCTGGAATGATTGATAACCTGAATGTACCGCGTGAACTTAAGAACATAATTTACTAAACA AATTGATATGCATTTGACTGTTACATGCCATATTTTGAATTTCGAAAATTGCAACTCATCTCCCTCATCATCTTATTGTCTGCATTTTTTTATGGTGATC CAATGCCCTCTTAAATCAGAGGTAGGTAGTTTTGGTTGGCGCATTCTAACCAAGCTACAGAATTTTCACTGACTTTGTTAAATGATTAATGACTTTCCTA TAAGCTATTGTTAAGTGTTCCTTAGGATCTTAACTTTACTGAACTGAATTGTTTTGTACAATTGCAGGAATATGAAGACAGATTAGCAGTTGTGAAGATT GATCATGATGCCAACCCAAGGCTAATTGAAGAATATAAAGTTTATGGACTACCAACTTTGATACTCTTCAATAATGGACAGGAAGTTGCAGAAAGCAGAA GGGAAGGTGCAATTACAAAAGTGAAACTTAAAGAATATGTGGATGCTTTATTGGAATCAATATCAGTTCCATAGTCATTGGAAGAGAGGGTTTGCCATGC TTTTGTTTTGCACTTTGAGTTGTATAACCCGAGTCTCAAATACAGTTTCATTTATTTTATGTAATTCAGTTGTTTAGTACTCTTCTGTTTAGATGGGTCA TCCGGCAAAATTAAACATGTAATGTTTGCTCAATTCTACATGCAAATTTCAGAGTTTTTGTAATTTTTATTTTGTAAAACAAGAACTTATGAGGGCAAAG ATGCTCATAAAAACTTGGGAATTGGGACAATAAGAAATACTCCTTGAATTAAAAATAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_223646; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_427916
| Blastp | Thioredoxin X, chloroplastic from Arabidopsis with 42.15% of identity |
|---|---|
| Blastx | Thioredoxin X, chloroplastic from Arabidopsis with 73.53% of identity |
| Eggnog | Thioredoxin(COG0526) |
| Kegg | Link to kegg annotations (AT1G50320) |
| CantataDB | Link to cantataDB annotations (CNT0002467) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427780.1) |
| Pfam | Thioredoxin (PF00085.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |