Id Trinity | TRINITY_DN9458_c0_g1_i1 |
---|---|
Name Transcript | Ll_transcript_294015 |
Sequence | GGAAAACCATAGATGAGGTTGTTATTGGGCTTCTCATTAGTTTAAGCCCATTTGATCAAAACGTCATCAACTTTCATTTTCCTACAAAATTTTATAAGTG TTAATTTTATTAGTGCCAAAAATATAATGAAGGATCCAGTAAAACTATCCATTTCTTCTATGTTAAAATGATTCATTCCGTTCCCAGGTCTAATACAAAT TGTTAATTTGAAAACAATGGGTTCAACTCCCACACTGAAAAACAACAACAACATTATGGATCAAGAAAACGGCACCATTTCATCTCCAATTTCCGCAACC TTATCATCCTCCATAGAGTGGGGCACACCGGAAGCCGTTGAATACGTTCGATCCCTAACCGAAGTTGGCGCAATGACGCGCCTCCTCCACGAGTGTATCG CACACCAACGCGCCTTAGATTTTGAACTGGACGATCTCTTATCTCACCGTAACGATCTTGATAAACATCTTCTTCAACTTCAACGCTCCTCTGAAGTTCT CAACATTGTTAAATCTGACTCTGATTTCATGCTGAACAATGTTTCTTCTACTTGTGATCTCGCTGATGACGTGAGCAGGAAGGTTCGTGAACTTGATCTA GCGCAGTCGCGCGTCAGATCCACGCTTTCCAGGATTGATGCCATTGTTGAGAGGGGGAATTGTTTGGAAGGTGTGTATCGGGCGCTTGATTCGGAGGATT ATGAATCAGCAGCGAGGTATGTGCAGGGTTTTCTTAAGATCGATGCTGAGTATAAGGATTGTGGGAATGATGAGAGGGAGAGGTTGATGAGCGCAAAGAA GCAGCTTGAAGCGATTGTGAGGAAGAAGCTCTCAGTTGCGGTGGATCAGAGAGATCATGGCTCGATTTTGAGGTTTATTCGGCTTTATACACCGCTAGGG TTGGAGGAGGAGGGGTTGCAGGTCTATGTTGGCTATTTGAAGAAAGTAATTGGGATGAGGTCGAGGATCGAGTTTGAACAATTGGTGGATTTGATGGAAC AGAGAAATAATGGAAGCAATGTCAATGTTAATTTTGTTTTGTGTTTGACTAATTTGTTTAAGGATATTGTTTTGGCGATAGAAGAGAATAATGAGATTTT GAGTGGTTTGTGTGGTGAGGATGGGATTGTGTATGCAATTTGTGAGCTACAAGAGGAATGTGATTCGCGAGGTTCTGTGATTTTGAAAAAGTATATGGAT TTTAGGAAGTTAGCTAAGTTGTCGTCTGAAATCAATGCGCAGAACAGTAATTTATTGGCAGTCGGAGGAGGTGCCGAGGGACCGGATCCGCGAGAGGTTG AGTTGTACTTGGAGGAAATTCTGTCACTTATGCAATTGGGTGAGGATTATACAGAGTTCGCGATTTCGAAGATCAAGGGTCTTACTTCTGTGGACCCCGA ACTGGTCCCTCGTGCGACGAAGGCTTTCAAGAGCGGTAGTTTCAGTAAGGTTGCACAAGATTTAACTGGATTTTATGTGATTCTGGAAGGGTTCTTCATG GTGGAAAATGTTAGGAAAGCTATACGGATTGATGAACAGGTGCCTGATAGCCTTACCACTTCTATGGTGGATGATGTTTTTTATGTCTTGCAGAGTTGTT TGCGAAGGGCAATATCCACTTCGAATATAAGTTCTGTTATAGCGGTTTTGAGTGGCGCTAGTAGTTTATTAACCAATGAGTATCAAGAAGCCCTACAGCA GAAAATAAGGGAGCCGAACCTTGGTGCAAAATTGTTCTTTGGTGGTGTTGGCGTGCAGAAAACTGGGACCGAAATTGCAACAGCTTTAAATAATATAGAT GTTAGCAGTGAATATGTTCTGAAGCTGAAGTATGAAATTGAAGAACAGTGTGCTGAGGTTTTTCCTGCACCGGCAGATCGAGAAAAGGTAAAATCGTGTT TGTCTGAAATGGGTGAAAGCAGCAATGCTTTCAAGCAAGCCTTGAATGCTGGCATAGAACAACTTGTGGCAACCATTACACCACGAATACGGCCAGTTTT AGACAGTGTAGGAACAATTAGCTATGAACTTTCAGAGGCCGAGTATGCAGATAACGAGGTGAATGACCCATGGGTTCAAAGACTTCTCCATGCCGTGGAG ACAAATGTGGCATGGCTGCAGCCACTGATGACTGCCAACAACTATGACACTTTTGTTCATTTGGTTATCGACTTCATCGTGAAAAGGCTTGAAGTGATTA TGATGCAGAAAAGATTCAGTCAGCTTGGTGGCCTTCAGCTTGACAGAGATACTCGAGCATTGGTAAGCCATTTTAGCATCATGACTCAGCGAACTGTTCG AGACAAGTTTGCGCGTCTCACTCAAATGGCAACAATTCTAAACTTAGAAAAAGTGTCTGAGATTCTTGATTTCTGGGGAGAAAACTCCGGACCTATGACC TGGAGATTAACTCCGGCAGAGGTTAGGCGCGTATTGGGTCTACGAGTTGATTTTAAACCGGAAGCTATAGTTGCTCTAAAGTTGTAATTCCCCTCTTCTT GGTCTTTTCACATTCTTTTCATTTCCTTCTCCCCCTTATCTGATAAGTCTTATTGTCATTATTTTTAGTGTTTGTGTAGCTAAACATAAAGTTTTGTTAT GTTATTTGCATCAATCAGATTTACCCCACAAGATTGTCCTTGCTACATGTAGCATCTTGTGTAAAACAGGCATTTTTCTTCATTATCTATTGTCATATTT TGAAATAAATACATAATTTTTTGTAGATATATAACTTTTTTACATTTGAAAGTTTTAAGATAGGAAAAATCCGACTCGATTTATGTGTACATTTATCCTC CTCATATCCCACTAAATGAGAGTCTCATGTATCAGGTCG BLAST |
Tissue | pods |
Gene name | LI_gene_223982; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_294015
Blastp | Conserved oligomeric Golgi complex subunit 4 from Arabidopsis with 79.12% of identity |
---|---|
Blastx | Conserved oligomeric Golgi complex subunit 4 from Arabidopsis with 79.28% of identity |
Eggnog | component of oligomeric golgi complex 4(ENOG410XS60) |
Kegg | Link to kegg annotations (AT4G01395) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419514.1) |
Pfam | COG4 transport protein (PF08318.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |