Id Trinity | TRINITY_DN9647_c0_g1_i1 |
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Name Transcript | Ll_transcript_424628 |
Sequence | GTTCTATAATCTATATTTACGTATTTTCTGTTCTATGCTTACCTTTTATTATCTCTGTCATTCTCTTTCTCTTGTACATGAATTAGTTGAATGGTTGTAG AGAGAAGAAATAAGATTCATGATCGAAAGGGATGGCTCTGCAAAAGGGATTGTTTTTAGTCAGTTCACACCATTCTTGGATCTCATAGGTTACTCTTTAG AAAAGTCTGGAGTCTCTTGCATTCAATTGAATGGATCAATGTCATTGCCTGCTAGGGATGCTGCCATTAAGAAATTTACGGATGATCCAAACTACAAAAT ATTTCTTGTGAGCTTGAAAGCTGGAGGTGTTGCACTAAATTTGACAGTAGCGTCACATGTTTTTTTTATGGACCCTTGGTGGAACTCCGCTGTGGAGCGT CAGGCTCAAGACAGAATTAATCGAATAGGGCAAAACAAACCTATAAGAATTGTGAGGTTTGTGATCGAGAACACAATCGAAGAGAGACTTTTGAAGCTCC AAGAGAAGAGGGAAGTAGTTTTTGAAGGGACTATAGGCGACTCTTTTGAAGATCTGGAGAAATTGACTGCAGAAGACTTCAAATTTCTCTTCCAATAAGA TTCCTCTTCTTTCCCTATAAGGATTGCAAAAAGTAGAAGATTTACATTACAATTTGGTGCATGGAAATATGCATGCTTCACCTCTAAATAAGTATATGTT TCCTTGTGGTTTGAAGAAAAGCTAGTTCATGCCAGATACAGAATATGAAAACATTTTTCTTGTTTTTGGACCAAAATATAAAAATGTTGGCAAG BLAST |
Tissue | pods |
Gene name | LI_gene_224039; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_424628
Blastp | ATP-dependent helicase rhp16 from Schizosaccharomyces with 53.85% of identity |
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Blastx | ATP-dependent helicase rhp16 from Schizosaccharomyces with 52.76% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447734.1) |
Pfam | Helicase conserved C-terminal domain (PF00271.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |