Ll_transcript_317566

• Id Trinity: TRINITY_DN9846_c0_g1_i1
• Name Transcript: Ll_transcript_317566
• Sequence: ACGAATATCCTGAAACTCAACAATCCCTCCACCGGCGCCGCCACCACGACCACCATGTGCTCTTCATCTCCGGTGTTCATATCCACTGAGAGCTTATGCT CAATCCTCACCCATCAAACTCTGATCCATCACTTCCAATCCACTCTCCCCAAAGTCTCTACTTTGCTCCATTCCCCAATTCGCCAACACTATTCTCTCTC TCCTTCTTCCTCTCTCCTCCTCATGCCTTCTTGGTCCTCTTCCCCTTCTTTCCCTTACATTGGTGTCAAGCTTGTCACTCATTTCCCTCACAACTCTTCT CTCAATTTGCCTGGTGTTCAAGGAAGCTATGTCCTTTTTAGTTCCACCACAGGACAAACTATTGCTACCATGGACTCCACTGAACTCACCCTTTATAGAA CCTCCTCTGTTTCTGGCTTGGCTTCTACTTACTTGGCTAGAAATGATAGTCAAGTTCTTGTTATGGTTGGTGCTGGTGCCTTGGCTCCTCATTTGATAAG AGCTCATCTTTCAGCCAGACCCAGTTTGAGAAAAGTTATAATTTGGAACAGGACAGTGGCAAAGGCAAGAACTTTGGCACAGAAACTCAGAGAAAGTCAT GGGTTTGAAGGGTTGGATTTTGAGGGTACTGGTGAGAATTTGGATGAGGTTGTTGGACTTGGGGACATTGTAAGTTGTGCCACTAATTCTGAGACACCTC TTGTTAAAGGTGAGAAGTTGAAGGCTGGTGCTCATTTGGATTTGGTGGGTTCCTTCACGCATTCGATGAAGGAATGTGATGATGAGGCCATAAGAAGGGG AAGGGTCTTTGTGGATAATGATGTTGCCCTAGAAGAAGCAGGGGAGCTGGTGGGTGCTTTTGAAAGAGGAGTGATCAAGAAAGTTGAAATTGTAGGGAAT TTGGTTGAACTTGTTAGAGGAGACAAGGTTGGGAGAAGCAGTGTAGAGGAAATCACTGTGTTCAAGTCAGTTGGTTCTGCTGTAGTAGATATGCTTGCAG CACAATTGGTGTATGAGACTTACACAAGAAGCTGAACACTACTATCTCACTGTAGTTTATGCTAAATTTTTCAATAAGATTATGGAGCTATGCACTCCCA CAGCTTCTAATACAAACTAGAAATAAGACTTTCACAATATCTGTGACTGATGGTAGTTTTTAAATTTTAATAAGTTCAAATGATCATGTCTATTTGATAA TGTTAGTACTTGCTTTATCAAATGAAAGTACTGATATGATTATATATAAATCTTAGTGTAATACAACTGAACAGTTTATATCATTAGATTATTACTGTTT TATAGATACTTTTCAAAATAGAGTCATTGTAACATGACTCTGAGCTATCCCAGTACTTAGTCATGGTTACACTTGCAACAGAATAAAATTATCAAAGCCA G
• Tissue: pods
• Gene name: LI_gene_224088;
• Additional information: details;

Expression of Ll_transcript_317566

FPKM

• PAB: 1.3
• PNAB: 16.7
• PS1: 76.1
• PS2: 62.7
• PS3: 126.2
• PW1: 4.4
• PW2: 3
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_317566

• Blastp: Protein SAR DEFICIENT 4 from Arabidopsis with 68.24% of identity
• Blastx: Protein SAR DEFICIENT 4 from Arabidopsis with 68.24% of identity
• Eggnog: Ornithine Cyclodeaminase(COG2423)
• Kegg: Link to kegg annotations (AT5G52810)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428310.1)
• Pfam: Ornithine cyclodeaminase/mu-crystallin family (PF02423.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;