ta-siRNA 101 details

ID101
SequenceAGTTCGGGTTAGGGTATTTGCTCT 

Targets of siRNA 101

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details
Ll_transcript_251675; 40 63 ATAGCAAATACCCTAACCCGAACC BLAST
Ll_transcript_19135; 426 449 ATAGCAAAGACCCTAACCCGAACT BLAST
Ll_transcript_19152; 426 449 ATAGCAAAGACCCTAACCCGAACT BLAST
Ll_transcript_19127; 426 449 ATAGCAAAGACCCTAACCCGAACT BLAST
Ll_transcript_196252; 66 89 ACAACTAATACCCTAACCCGAACT BLAST
Ll_transcript_196267; 2805 2828 ACAACTAATACCCTAACCCGAACT BLAST
Ll_transcript_21435; 903 926 AGAGCAAAGACCCTAACCCGAACC BLAST
Ll_transcript_246585; 3728 3751 AGAGCAAAGACCCTAACCCGAACC BLAST
Ll_transcript_227511; 244 267 AGAACAAAGACCCTAACCCGAACC BLAST
Ll_transcript_196253; 158 181 ACAACTAATACCCTAACCCGAACC BLAST
Ll_transcript_196254; 2805 2828 ACAACTAATACCCTAACCCGAACC BLAST
Ll_transcript_243891; 189 212 AGTGCAAAGACTCTAACCCGAACT BLAST
Ll_transcript_305941; 243 266 AGAGCAAAAACCCTAACCCGAACT BLAST
Ll_transcript_306831; 127 150 ATAGCAAATGCCCTAACCCGAACT BLAST
Ll_transcript_306841; 127 150 ATAGCAAATACCCTAACCCGAACC BLAST
Ll_transcript_305938; 2521 2544 ATAGCAAATACCCTAACCCGAACC BLAST
Ll_transcript_343974; 659 682 ATAGCAAAGACCCTAACCCGAACT BLAST
Ll_transcript_352673; 37 60 ACAACTAATACCCTAACCCGAACT BLAST
Ll_transcript_501573; 324 347 ACAACTAATACCCTAACCCGAACT BLAST
Ll_transcript_429321; 551 574 AGAGCAAAGACCCTAACCCGAACC BLAST
Ll_transcript_295396; 733 756 AGAGCAAAGACCCTAACCCGAACC BLAST
Ll_transcript_295390; 1032 1055 AGAGCAAAGACCCTAACCCGAACC BLAST
Ll_transcript_295386; 1823 1846 AGAGCAAAGACCCTAACCCGAACC BLAST
Ll_transcript_295389; 1849 1872 AGAGCAAAGACCCTAACCCGAACC BLAST
Ll_transcript_453399; 53 76 AGAGCAAAGTCCCTAACCCGAACT BLAST
Ll_transcript_441241; 2754 2777 ACAACTAATACCCTAACCCGAACC BLAST
Ll_transcript_441235; 2671 2694 ACAACTAATACCCTAACCCGAACC BLAST
Ll_transcript_441237; 2754 2777 ACAACTAATACCCTAACCCGAACC BLAST
Ll_transcript_475782; 288 311 ATAACAAAGATCCTAACCCGAACC BLAST

Expression of siRNA 101


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)