Transcript | Ll_transcript_380060 |
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CDS coordinates | 446-3403 (+) |
Peptide sequence | MATESPIRISKTSGKWPSLTQAATYGPPSHNMATEDLGVLLKGPRFRGSGKIVAPNRSGSAPPSMEGSFHAIENLLSQQNTTQNASLATLNKAMQKCESEEQLRADPAYLAYYSSHVNLNPRLPPPLISRENRHMGHHISSFNNNWGSPFADDSSRSSTHLSQWTLATHKEESEDESPQQPYDNESVKTSDIWPRPDEASSASQHKNVVDLIQEDFPRTVSPVYNKSLSISRGLVDEPIDLGAGSTSSHDPPVTTAEAAKPAGGADERSVLPTVDSHAPVASSSSIESTGSVGFSDIDVTAVESQLKALSVSNIPNLESMSNEEKWKTSYQSNLMQHQKYHQQNNKYETPDANSQSVNSAYVGREQFPRNSSKFSDVQPVLQSSGITPPLYATAAYMTSANPYYANLHASGIYTPQYVGGYTLNPTAIPSYITAYPPHGAVPLAVDGAASSSYTPLPPGVSTRGSVSYGAEMVHANKFPGHFGFPMQPSFGDPFYMQCHQQPFVEGYGIPGRFDPLAPRPSGGSQISPFDSQKSPSTGAYSDDKILHDQRASINMNSRRGGLTIPSYHGHPPNMGFVMQYPSSPRPSPRLSGYPEASPALQGRRSEMKPLPASGRNIGVLIGWQGQRYLDSTRDPKIVNFLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLECCGVEEKALVFKEVLPHASKLITDVFGNYVIQKFFEYGSPEQRRELANQLAGQILTLSLQMYGCRVIQKALEVIELEQKAQLVRELDGNVMKCVRDQNGNHVIQKCIESIPTKQIGFIISAFRGQVSNLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCSLAQDQYGNYVTQHVLERGNHQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYGDVNERELLIAEIVGQDEQDDNLLTMMKDQFANYVVQKVFDMCSENQRAKLLSCIRIHAHALKKYTYGKHIVSRLEQQFGDENPTPGA* |
ORF Type | complete |
Blastp | Pumilio homolog 5 from Arabidopsis with 44.65% of identity |
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Blastx | Pumilio homolog 6, chloroplastic from Arabidopsis with 46.13% of identity |
Eggnog | pumilio homolog(COG5099) |
Kegg | Link to kegg annotations (AT3G20250) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439368.1) |
Pfam | Pumilio-family RNA binding repeat (PF00806.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer