miRNA 105 details

Id Micro105
SequenceCGGTCTTGAGGCAGGAACTGAG 
Annotated namesosa-miR1861h; osa-miR1861j; 
Annotated pre-miRNANone

Targets of miRNA 105

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_7478; FTRINITY_DN58573_c1_g1_i1 226 247 ACCATTTTCTGCTTTAAGACCG BLAST psRNATarget
Ll_transcript_144937; FTRINITY_DN59026_c1_g1_i3 2126 2147 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_144943; FTRINITY_DN59026_c1_g1_i9 2538 2559 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_144955; FTRINITY_DN59026_c1_g1_i19 2674 2695 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_144959; FTRINITY_DN59026_c1_g1_i23 2827 2848 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_260233; FTRINITY_DN57996_c1_g3_i1 211 232 GTCAGTTCCTGTCTTAATATCG BLAST psRNATarget
Ll_transcript_135119; FTRINITY_DN58022_c0_g1_i6 1084 1105 TTTGGTTTCTGCCTCAACACTG BLAST psRNATarget
Ll_transcript_97081; FTRINITY_DN47622_c0_g1_i2 810 831 CCAAGTTCTTGTTTCAGGATTG BLAST psRNATarget
Ll_transcript_97080; FTRINITY_DN47622_c0_g1_i1 1756 1777 CCAAGTTCTTGTTTCAGGATTG BLAST psRNATarget
Ll_transcript_101255; FTRINITY_DN54907_c1_g2_i2 435 456 CTTAGTTTTTGTCTCAAGAATG BLAST psRNATarget
Ll_transcript_101254; FTRINITY_DN54907_c1_g2_i1 435 456 CTTAGTTTTTGTCTCAAGAATG BLAST psRNATarget
Ll_transcript_101258; FTRINITY_DN54907_c1_g2_i3 435 456 CTTAGTTTTTGTCTCAAGAATG BLAST psRNATarget
Ll_transcript_101266; FTRINITY_DN54907_c1_g2_i4 435 456 CTTAGTTTTTGTCTCAAGAATG BLAST psRNATarget
Ll_transcript_12564; FTRINITY_DN69839_c0_g1_i1 53 74 TTCATTTGCTGCCTCAAGATCA BLAST psRNATarget
Ll_transcript_36177; FTRINITY_DN58701_c0_g2_i24 1047 1068 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_36157; FTRINITY_DN58701_c0_g2_i7 1047 1068 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_36174; FTRINITY_DN58701_c0_g2_i22 1047 1068 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_36172; FTRINITY_DN58701_c0_g2_i20 1119 1140 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_36164; FTRINITY_DN58701_c0_g2_i13 1124 1145 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_36180; FTRINITY_DN58701_c0_g2_i27 1124 1145 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_267759; FTRINITY_DN55870_c0_g2_i1 184 205 TTTAGTGCTTGCCTTAGGATTG BLAST psRNATarget
Ll_transcript_17913; FTRINITY_DN54517_c1_g3_i1 255 276 CTTACCTCCTGCTTTAAGATCG BLAST psRNATarget
Ll_transcript_36188; FTRINITY_DN58701_c0_g2_i32 1047 1068 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_36195; FTRINITY_DN58701_c0_g2_i39 1119 1140 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_36193; FTRINITY_DN58701_c0_g2_i37 1124 1145 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_3073; FTRINITY_DN78803_c0_g1_i1 430 451 AGCAGTTCTAGCCTCAAGATCA BLAST psRNATarget
Ll_transcript_131864; FTRINITY_DN57584_c6_g4_i2 1336 1357 AGCAGTTCTTGCTTCAATACCA BLAST psRNATarget
Ll_transcript_131865; FTRINITY_DN57584_c6_g4_i3 1595 1616 AGCAGTTCTTGCTTCAATACCA BLAST psRNATarget
Ll_transcript_131873; FTRINITY_DN57584_c6_g4_i6 1904 1925 AGCAGTTCTTGCTTCAATACCA BLAST psRNATarget
Ll_transcript_131867; FTRINITY_DN57584_c6_g4_i4 1483 1504 AGCAGTTCTTGCTTCAATACCA BLAST psRNATarget
Ll_transcript_131863; FTRINITY_DN57584_c6_g4_i1 2051 2072 AGCAGTTCTTGCTTCAATACCA BLAST psRNATarget
Ll_transcript_109665; FTRINITY_DN51459_c0_g1_i4 1404 1425 ACCGGTTCTTGCCTAAGGACTG BLAST psRNATarget
Ll_transcript_109663; FTRINITY_DN51459_c0_g1_i2 1205 1226 ACCGGTTCTTGCCTAAGGACTG BLAST psRNATarget
Ll_transcript_109662; FTRINITY_DN51459_c0_g1_i1 1404 1425 ACCGGTTCTTGCCTAAGGACTG BLAST psRNATarget
Ll_transcript_105127; FTRINITY_DN52913_c4_g2_i2 335 356 TTAAGTTTCTGCTTCAAAACCC BLAST psRNATarget
Ll_transcript_105141; FTRINITY_DN52913_c4_g2_i4 335 356 TTAAGTTTCTGCTTCAAAACCC BLAST psRNATarget
Ll_transcript_105122; FTRINITY_DN52913_c4_g2_i1 335 356 TTAAGTTTCTGCTTCAAAACCC BLAST psRNATarget
Ll_transcript_74227; FTRINITY_DN48516_c1_g1_i1 1184 1205 TTAAGTTCCTGCCTTAAGTCTT BLAST psRNATarget
Ll_transcript_238515; FTRINITY_DN54492_c0_g2_i4 25 46 TATGGTTCCTACCTTAAGACCT BLAST psRNATarget
Ll_transcript_238522; FTRINITY_DN54492_c0_g2_i8 25 46 TATGGTTCCTACCTTAAGACCT BLAST psRNATarget
Ll_transcript_238516; FTRINITY_DN54492_c0_g2_i5 25 46 TATGGTTCCTACCTTAAGACCT BLAST psRNATarget
Ll_transcript_177991; FTRINITY_DN58615_c2_g1_i23 274 295 TATGGTTCCTACCTTAAGACCT BLAST psRNATarget
Ll_transcript_177976; FTRINITY_DN58615_c2_g1_i11 292 313 TATGGTTCCTACCTTAAGACCT BLAST psRNATarget
Ll_transcript_206722; FTRINITY_DN23668_c0_g1_i1 395 416 TGCTGTTTTTGCTTCAAGACCC BLAST psRNATarget
Ll_transcript_117027; FTRINITY_DN50954_c0_g1_i5 1490 1511 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget
Ll_transcript_117024; FTRINITY_DN50954_c0_g1_i2 1490 1511 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget
Ll_transcript_117030; FTRINITY_DN50954_c0_g1_i8 1501 1522 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget
Ll_transcript_117028; FTRINITY_DN50954_c0_g1_i6 1527 1548 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget
Ll_transcript_419621; TRINITY_DN48769_c0_g5_i1 475 496 AGCAGTTCTTGCCTCAACACTG BLAST psRNATarget
Ll_transcript_307123; TRINITY_DN52278_c0_g1_i5 1592 1613 ACCATTTTCTGCTTTAAGACCG BLAST psRNATarget
Ll_transcript_307130; TRINITY_DN52278_c0_g1_i12 1643 1664 ACCATTTTCTGCTTTAAGACCG BLAST psRNATarget
Ll_transcript_307134; TRINITY_DN52278_c0_g1_i16 1592 1613 ACCATTTTCTGCTTTAAGACCG BLAST psRNATarget
Ll_transcript_307137; TRINITY_DN52278_c0_g1_i19 1643 1664 ACCATTTTCTGCTTTAAGACCG BLAST psRNATarget
Ll_transcript_307132; TRINITY_DN52278_c0_g1_i14 1865 1886 ACCATTTTCTGCTTTAAGACCG BLAST psRNATarget
Ll_transcript_307127; TRINITY_DN52278_c0_g1_i9 1865 1886 ACCATTTTCTGCTTTAAGACCG BLAST psRNATarget
Ll_transcript_307138; TRINITY_DN52278_c0_g1_i20 1592 1613 ACCATTTTCTGCTTTAAGACCG BLAST psRNATarget
Ll_transcript_307121; TRINITY_DN52278_c0_g1_i3 1865 1886 ACCATTTTCTGCTTTAAGACCG BLAST psRNATarget
Ll_transcript_307133; TRINITY_DN52278_c0_g1_i15 1643 1664 ACCATTTTCTGCTTTAAGACCG BLAST psRNATarget
Ll_transcript_307122; TRINITY_DN52278_c0_g1_i4 1865 1886 ACCATTTTCTGCTTTAAGACCG BLAST psRNATarget
Ll_transcript_490722; TRINITY_DN50314_c0_g1_i6 715 736 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_490733; TRINITY_DN50314_c0_g1_i15 1303 1324 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_490721; TRINITY_DN50314_c0_g1_i5 1451 1472 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_490731; TRINITY_DN50314_c0_g1_i13 1877 1898 CTCAGTTTCTGTCTCAAGATTT BLAST psRNATarget
Ll_transcript_517220; TRINITY_DN51211_c1_g1_i12 813 834 TTTGGTTTCTGCCTCAACACTG BLAST psRNATarget
Ll_transcript_502460; TRINITY_DN70571_c0_g1_i1 99 120 GGGGGTTTCTGTTTCAAGACCC BLAST psRNATarget
Ll_transcript_279622; TRINITY_DN50153_c1_g1_i2 762 783 CCAAGTTCTTGTTTCAGGATTG BLAST psRNATarget
Ll_transcript_279621; TRINITY_DN50153_c1_g1_i1 1708 1729 CCAAGTTCTTGTTTCAGGATTG BLAST psRNATarget
Ll_transcript_446564; TRINITY_DN51840_c0_g1_i28 1050 1071 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_446553; TRINITY_DN51840_c0_g1_i17 1050 1071 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_446539; TRINITY_DN51840_c0_g1_i5 1050 1071 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_446537; TRINITY_DN51840_c0_g1_i3 1050 1071 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_446546; TRINITY_DN51840_c0_g1_i11 1102 1123 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_446554; TRINITY_DN51840_c0_g1_i18 1454 1475 ATCAGTTACTGCCTCGATACTG BLAST psRNATarget
Ll_transcript_463149; TRINITY_DN52629_c0_g2_i4 158 179 TTTAGTGCTTGCCTTAGGATTG BLAST psRNATarget
Ll_transcript_319919; TRINITY_DN46220_c0_g2_i1 141 162 AGCAGTTCTTGCTTCAATACCA BLAST psRNATarget
Ll_transcript_319918; TRINITY_DN46220_c0_g1_i7 1314 1335 AGCAGTTCTTGCTTCAATACCA BLAST psRNATarget
Ll_transcript_319920; TRINITY_DN46220_c0_g1_i8 1501 1522 AGCAGTTCTTGCTTCAATACCA BLAST psRNATarget
Ll_transcript_453194; TRINITY_DN41678_c0_g1_i1 1473 1494 ACCGGTTCTTGCCTAAGGACTG BLAST psRNATarget
Ll_transcript_365745; TRINITY_DN46311_c2_g3_i3 262 283 TTAAGTTTCTGCTTCAAAACCC BLAST psRNATarget
Ll_transcript_365758; TRINITY_DN46311_c2_g3_i4 262 283 TTAAGTTTCTGCTTCAAAACCC BLAST psRNATarget
Ll_transcript_396407; TRINITY_DN41992_c0_g4_i1 1384 1405 TTAAGTTCCTGCCTTAAGTCTT BLAST psRNATarget
Ll_transcript_486793; TRINITY_DN52377_c0_g1_i21 210 231 TATGGTTCCTACCTTAAGACCT BLAST psRNATarget
Ll_transcript_486784; TRINITY_DN52377_c0_g1_i13 491 512 TATGGTTCCTACCTTAAGACCT BLAST psRNATarget
Ll_transcript_486772; TRINITY_DN52377_c0_g1_i1 491 512 TATGGTTCCTACCTTAAGACCT BLAST psRNATarget
Ll_transcript_504075; TRINITY_DN44085_c0_g1_i7 1505 1526 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget
Ll_transcript_504069; TRINITY_DN44085_c0_g1_i3 1505 1526 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget
Ll_transcript_504070; TRINITY_DN44085_c0_g1_i4 1516 1537 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget
Ll_transcript_504076; TRINITY_DN44085_c0_g1_i8 1542 1563 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget
Ll_transcript_504067; TRINITY_DN44085_c0_g1_i1 1764 1785 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget
Ll_transcript_504077; TRINITY_DN44085_c0_g1_i9 1505 1526 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget
Ll_transcript_504071; TRINITY_DN44085_c0_g1_i5 1764 1785 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget
Ll_transcript_504068; TRINITY_DN44085_c0_g1_i2 1775 1796 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget
Ll_transcript_504072; TRINITY_DN44085_c0_g1_i6 1764 1785 TACAGTTGCTGCCTTAGGACTA BLAST psRNATarget

Expression of miRNA 105


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)