miRNA 106 details

Id Micro106
SequenceCGGTCTTGTGGCAAGAACTGAG 
Annotated namesosa-miR1861e; osa-miR1861k; osa-miR1861m; 
Annotated pre-miRNANone

Targets of miRNA 106

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_73461; FTRINITY_DN56081_c1_g1_i6 360 381 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_73460; FTRINITY_DN56081_c1_g1_i5 360 381 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_73467; FTRINITY_DN56081_c1_g1_i9 1002 1023 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_73472; FTRINITY_DN56081_c1_g1_i11 360 381 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_73466; FTRINITY_DN56081_c1_g1_i8 1002 1023 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_73475; FTRINITY_DN56081_c1_g1_i14 1080 1101 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_73456; FTRINITY_DN56081_c1_g1_i3 360 381 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_73455; FTRINITY_DN56081_c1_g1_i2 1002 1023 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_73473; FTRINITY_DN56081_c1_g1_i12 1080 1101 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_73474; FTRINITY_DN56081_c1_g1_i13 1002 1023 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_217479; FTRINITY_DN56371_c1_g2_i13 454 475 TGCAGTTCTTGTCACAGGGTTG BLAST psRNATarget
Ll_transcript_161345; FTRINITY_DN83808_c0_g1_i1 199 220 TGCAGGTCTTGCCGCAAGACCA BLAST psRNATarget
Ll_transcript_229105; FTRINITY_DN52707_c2_g3_i1 176 197 AGAAGTTCTTGCCGCAAGGGTG BLAST psRNATarget
Ll_transcript_229106; FTRINITY_DN52707_c2_g3_i2 235 256 AGAAGTTCTTGCCGCAAGGGTG BLAST psRNATarget
Ll_transcript_148805; FTRINITY_DN57615_c5_g1_i2 323 344 GTAAGTTTTTGTTATGAGATCG BLAST psRNATarget
Ll_transcript_75318; FTRINITY_DN55558_c5_g8_i2 149 169 ATTGGTTTTGCCACAAGATCG BLAST psRNATarget
Ll_transcript_246957; FTRINITY_DN53358_c1_g8_i1 1407 1428 TTTAGTTTTTGCCGTAATATCG BLAST psRNATarget
Ll_transcript_225812; FTRINITY_DN56188_c2_g4_i1 104 125 AGCATTTCTTGTCATAAGACTT BLAST psRNATarget
Ll_transcript_113827; FTRINITY_DN59313_c0_g4_i1 139 160 TGCATTTCTTGTTACAAGATCA BLAST psRNATarget
Ll_transcript_77988; FTRINITY_DN67892_c0_g1_i1 805 826 TGTAGTTCTTGTCAGAAGACTA BLAST psRNATarget
Ll_transcript_271369; FTRINITY_DN51023_c0_g1_i5 580 601 GATTGTTCTTGTCATGAGACCT BLAST psRNATarget
Ll_transcript_271370; FTRINITY_DN51023_c0_g1_i6 778 799 GATTGTTCTTGTCATGAGACCT BLAST psRNATarget
Ll_transcript_271367; FTRINITY_DN51023_c0_g1_i3 778 799 GATTGTTCTTGTCATGAGACCT BLAST psRNATarget
Ll_transcript_81906; FTRINITY_DN49809_c0_g1_i2 591 612 ATTGATACTTGCCACAAGATTG BLAST psRNATarget
Ll_transcript_309532; TRINITY_DN47107_c7_g1_i4 377 398 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_309534; TRINITY_DN47107_c7_g1_i6 377 398 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_309529; TRINITY_DN47107_c7_g1_i2 377 398 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_309537; TRINITY_DN47107_c7_g1_i8 377 398 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_309528; TRINITY_DN47107_c7_g1_i1 377 398 CGGGGTTCTTGCCACAGGACCA BLAST psRNATarget
Ll_transcript_469997; TRINITY_DN45415_c0_g2_i1 187 208 TGCAGGTCTTGCCGCAAGACCA BLAST psRNATarget
Ll_transcript_297647; TRINITY_DN37027_c0_g1_i1 229 250 CAGCGTTCTTGCTGCAGGACCG BLAST psRNATarget
Ll_transcript_355697; TRINITY_DN45854_c0_g1_i1 931 952 GGGAGTTCTTGCTGCAGGACCC BLAST psRNATarget
Ll_transcript_355700; TRINITY_DN45854_c0_g2_i2 1084 1105 GGGAGTTCTTGCTGCAGGACCC BLAST psRNATarget
Ll_transcript_491155; TRINITY_DN50354_c2_g1_i1 81 102 TTCGGTTCTTGCCGCGAGGTTG BLAST psRNATarget
Ll_transcript_435374; TRINITY_DN46682_c0_g2_i5 318 339 AGAAGTTCTTGCCGCAAGGGTG BLAST psRNATarget
Ll_transcript_344331; TRINITY_DN50419_c4_g2_i5 114 134 ATTGGTTTTGCCACAAGATCG BLAST psRNATarget
Ll_transcript_342037; TRINITY_DN49807_c1_g1_i8 1076 1097 TTTAGTTTTTGCCGTAATATCG BLAST psRNATarget
Ll_transcript_342028; TRINITY_DN49807_c1_g1_i1 1462 1483 TTTAGTTTTTGCCGTAATATCG BLAST psRNATarget
Ll_transcript_419621; TRINITY_DN48769_c0_g5_i1 475 496 AGCAGTTCTTGCCTCAACACTG BLAST psRNATarget
Ll_transcript_306748; TRINITY_DN52251_c0_g2_i1 259 280 TTGAGTTTTTGGCATAAGATTG BLAST psRNATarget
Ll_transcript_458902; TRINITY_DN75762_c0_g1_i1 54 75 AGCATTTCTTGTCATAAGACTT BLAST psRNATarget
Ll_transcript_465022; TRINITY_DN52681_c0_g1_i7 197 218 TGCATTTCTTGTTACAAGATCA BLAST psRNATarget
Ll_transcript_465018; TRINITY_DN52681_c0_g1_i3 197 218 TGCATTTCTTGTTACAAGATCA BLAST psRNATarget
Ll_transcript_337056; TRINITY_DN48595_c7_g2_i11 404 425 TGTAGTTTTTACCACAAGACAG BLAST psRNATarget
Ll_transcript_522243; TRINITY_DN46599_c0_g1_i7 153 174 CCGTGTTCTTGTCACAGGGTTG BLAST psRNATarget
Ll_transcript_522247; TRINITY_DN46599_c0_g1_i11 460 481 CCGTGTTCTTGTCACAGGGTTG BLAST psRNATarget
Ll_transcript_427680; TRINITY_DN41241_c2_g2_i2 381 402 ATTGATACTTGCCACAAGATTG BLAST psRNATarget
Ll_transcript_522251; TRINITY_DN46599_c0_g1_i13 460 481 CCGTGTTCTTGTCACAGGGTTG BLAST psRNATarget

Expression of miRNA 106


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)