miRNA 109 details

Id Micro109
SequenceCGTTTCACGTCGGGTTCACC 
Annotated namesppt-miR894; 
Annotated pre-miRNANone

Targets of miRNA 109

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_212298; FTRINITY_DN58374_c2_g7_i4 282 301 AGTGAACCTGACGTGAATCG BLAST psRNATarget
Ll_transcript_212288; FTRINITY_DN58374_c2_g7_i1 282 301 AGTGAACCTGACGTGAATCG BLAST psRNATarget
Ll_transcript_212290; FTRINITY_DN58374_c2_g7_i2 282 301 AGTGAACCTGACGTGAATCG BLAST psRNATarget
Ll_transcript_212310; FTRINITY_DN58374_c2_g7_i11 282 301 AGTGAACCTGACGTGAATCG BLAST psRNATarget
Ll_transcript_212305; FTRINITY_DN58374_c2_g7_i8 282 301 AGTGAACCTGACGTGAATCG BLAST psRNATarget
Ll_transcript_212303; FTRINITY_DN58374_c2_g7_i7 282 301 AGTGAACCTGACGTGAATCG BLAST psRNATarget
Ll_transcript_212307; FTRINITY_DN58374_c2_g7_i9 282 301 AGTGAACCTGACGTGAATCG BLAST psRNATarget
Ll_transcript_105609; FTRINITY_DN52919_c0_g1_i9 2004 2023 TTTGAACCCGACGTGAATCG BLAST psRNATarget
Ll_transcript_105613; FTRINITY_DN52919_c0_g1_i12 2097 2116 TTTGAACCCGACGTGAATCG BLAST psRNATarget
Ll_transcript_105591; FTRINITY_DN52919_c0_g1_i1 2103 2122 TTTGAACCCGACGTGAATCG BLAST psRNATarget
Ll_transcript_105600; FTRINITY_DN52919_c0_g1_i4 2490 2509 TTTGAACCCGACGTGAATCG BLAST psRNATarget
Ll_transcript_50880; FTRINITY_DN58813_c3_g4_i1 40 59 ATTGGACCCGACGTGAAAAG BLAST psRNATarget
Ll_transcript_13667; FTRINITY_DN59200_c2_g2_i2 1696 1715 TGTTCACTCGATGTGAAACG BLAST psRNATarget
Ll_transcript_13672; FTRINITY_DN59200_c2_g2_i3 1809 1828 TGTTCACTCGATGTGAAACG BLAST psRNATarget
Ll_transcript_161412; FTRINITY_DN83886_c0_g1_i1 207 226 GGTGAATTCGATGTCAAATG BLAST psRNATarget
Ll_transcript_102578; FTRINITY_DN54995_c1_g2_i8 272 291 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_102565; FTRINITY_DN54995_c1_g2_i5 272 291 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_102570; FTRINITY_DN54995_c1_g2_i7 272 291 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_102564; FTRINITY_DN54995_c1_g2_i4 272 291 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_102561; FTRINITY_DN54995_c1_g2_i3 272 291 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_102566; FTRINITY_DN54995_c1_g2_i6 272 291 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_102557; FTRINITY_DN54995_c1_g2_i1 272 291 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_102579; FTRINITY_DN54995_c1_g2_i9 272 291 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_102558; FTRINITY_DN54995_c1_g2_i2 272 291 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_128442; FTRINITY_DN53406_c0_g1_i7 157 176 GCCGAACCCGATGTGAAACC BLAST psRNATarget
Ll_transcript_128444; FTRINITY_DN53406_c0_g1_i8 157 176 GCCGAACCCGATGTGAAACC BLAST psRNATarget
Ll_transcript_244127; FTRINITY_DN64309_c0_g1_i1 112 131 AGTGAACCCGACGCGAAGTT BLAST psRNATarget
Ll_transcript_65782; FTRINITY_DN68079_c0_g1_i1 583 602 AGTGAACCTTATGTGAAACA BLAST psRNATarget
Ll_transcript_235358; FTRINITY_DN52800_c6_g1_i1 377 396 AATGAACCCGACATGAAGTG BLAST psRNATarget
Ll_transcript_88838; FTRINITY_DN53963_c2_g1_i4 496 515 AATGAATTTGATGTGAAATG BLAST psRNATarget
Ll_transcript_78968; FTRINITY_DN58117_c0_g1_i12 1204 1223 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_78982; FTRINITY_DN58117_c0_g1_i24 1204 1223 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_78961; FTRINITY_DN58117_c0_g1_i6 1204 1223 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_78965; FTRINITY_DN58117_c0_g1_i10 1204 1223 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_78964; FTRINITY_DN58117_c0_g1_i9 1312 1331 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_78973; FTRINITY_DN58117_c0_g1_i16 1204 1223 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_78975; FTRINITY_DN58117_c0_g1_i18 1432 1451 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_78959; FTRINITY_DN58117_c0_g1_i4 1204 1223 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_78985; FTRINITY_DN58117_c0_g1_i25 1204 1223 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_194305; FTRINITY_DN50676_c1_g1_i1 1245 1264 TGTGAACTCGGTGTTGAACG BLAST psRNATarget
Ll_transcript_166915; FTRINITY_DN57362_c2_g2_i1 863 882 CGAGAACCTGATGTGAAATC BLAST psRNATarget
Ll_transcript_166917; FTRINITY_DN57362_c2_g2_i3 980 999 CGAGAACCTGATGTGAAATC BLAST psRNATarget
Ll_transcript_198912; FTRINITY_DN49709_c0_g1_i3 2559 2578 TGTGATTCTGATGTGAAACA BLAST psRNATarget
Ll_transcript_198910; FTRINITY_DN49709_c0_g1_i1 3204 3223 TGTGATTCTGATGTGAAACA BLAST psRNATarget
Ll_transcript_11635; FTRINITY_DN86216_c0_g1_i1 294 313 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_178337; FTRINITY_DN58628_c0_g1_i2 164 183 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_178349; FTRINITY_DN58628_c0_g1_i9 164 183 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_178341; FTRINITY_DN58628_c0_g1_i5 164 183 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_178338; FTRINITY_DN58628_c0_g1_i3 164 183 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_178344; FTRINITY_DN58628_c0_g1_i7 164 183 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_178345; FTRINITY_DN58628_c0_g1_i8 164 183 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_178343; FTRINITY_DN58628_c0_g1_i6 164 183 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_302940; TRINITY_DN48226_c4_g6_i1 82 101 AGTGAACCTGACGTGAATCG BLAST psRNATarget
Ll_transcript_302946; TRINITY_DN48226_c4_g6_i4 82 101 AGTGAACCTGACGTGAATCG BLAST psRNATarget
Ll_transcript_302944; TRINITY_DN48226_c4_g6_i3 82 101 AGTGAACCTGACGTGAATCG BLAST psRNATarget
Ll_transcript_302948; TRINITY_DN48226_c4_g6_i5 82 101 AGTGAACCTGACGTGAATCG BLAST psRNATarget
Ll_transcript_451483; TRINITY_DN50647_c0_g2_i1 200 219 ATTGGACCCGACGTGAAAAG BLAST psRNATarget
Ll_transcript_505422; TRINITY_DN52532_c2_g1_i8 3031 3050 TGTTCACTCGATGTGAAACG BLAST psRNATarget
Ll_transcript_505434; TRINITY_DN52532_c2_g1_i20 3252 3271 TGTTCACTCGATGTGAAACG BLAST psRNATarget
Ll_transcript_505420; TRINITY_DN52532_c2_g1_i6 3332 3351 TGTTCACTCGATGTGAAACG BLAST psRNATarget
Ll_transcript_311448; TRINITY_DN47160_c0_g1_i11 299 318 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_311452; TRINITY_DN47160_c0_g1_i15 299 318 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_311446; TRINITY_DN47160_c0_g1_i9 299 318 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_311456; TRINITY_DN47160_c0_g1_i19 299 318 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_311451; TRINITY_DN47160_c0_g1_i14 299 318 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_311445; TRINITY_DN47160_c0_g1_i8 299 318 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_311457; TRINITY_DN47160_c0_g1_i20 101 120 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_311449; TRINITY_DN47160_c0_g1_i12 101 120 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_311455; TRINITY_DN47160_c0_g1_i18 101 120 GGTGGATCTGGCGTGAAAAG BLAST psRNATarget
Ll_transcript_455466; TRINITY_DN49757_c0_g1_i2 1770 1789 GCCGAACCCGATGTGAAACC BLAST psRNATarget
Ll_transcript_455465; TRINITY_DN49757_c0_g1_i1 1821 1840 GCCGAACCCGATGTGAAACC BLAST psRNATarget
Ll_transcript_425040; TRINITY_DN29006_c0_g1_i1 131 150 AGTGAACCCGACGCGAAGTT BLAST psRNATarget
Ll_transcript_423455; TRINITY_DN47930_c5_g3_i8 74 93 AATGAATTTGATGTGAAATG BLAST psRNATarget
Ll_transcript_367123; TRINITY_DN16226_c0_g1_i1 584 603 AGTGAACCTTATGTGAAACA BLAST psRNATarget
Ll_transcript_332376; TRINITY_DN49074_c1_g1_i10 1198 1217 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_332377; TRINITY_DN49074_c1_g1_i11 1198 1217 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_332374; TRINITY_DN49074_c1_g1_i8 1094 1113 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_332373; TRINITY_DN49074_c1_g1_i7 1198 1217 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_332368; TRINITY_DN49074_c1_g1_i2 1306 1325 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_423453; TRINITY_DN47930_c5_g3_i7 74 93 AATGAATTTGATGTGAAATG BLAST psRNATarget
Ll_transcript_332369; TRINITY_DN49074_c1_g1_i3 1553 1572 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_332382; TRINITY_DN49074_c1_g1_i16 1868 1887 CTTGAACCCGGAGTGGAACG BLAST psRNATarget
Ll_transcript_352320; TRINITY_DN43833_c0_g1_i2 1357 1376 TGTGAACTCGGTGTTGAACG BLAST psRNATarget
Ll_transcript_366486; TRINITY_DN46363_c13_g1_i3 305 324 TGTGATTCTGATGTGAAACA BLAST psRNATarget
Ll_transcript_315948; TRINITY_DN46784_c2_g2_i4 1044 1063 CGAGAACCTGATGTGAAATC BLAST psRNATarget
Ll_transcript_315947; TRINITY_DN46784_c2_g2_i3 1072 1091 CGAGAACCTGATGTGAAATC BLAST psRNATarget
Ll_transcript_315943; TRINITY_DN46784_c2_g2_i1 1072 1091 CGAGAACCTGATGTGAAATC BLAST psRNATarget
Ll_transcript_315946; TRINITY_DN46784_c2_g2_i2 1072 1091 CGAGAACCTGATGTGAAATC BLAST psRNATarget
Ll_transcript_506320; TRINITY_DN52572_c1_g6_i1 378 397 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_506321; TRINITY_DN52572_c1_g3_i7 165 184 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_506326; TRINITY_DN52572_c1_g3_i9 165 184 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_506305; TRINITY_DN52572_c1_g3_i2 165 184 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_506314; TRINITY_DN52572_c1_g3_i3 165 184 CGAGAATCCGACTTGGAACG BLAST psRNATarget
Ll_transcript_506319; TRINITY_DN52572_c1_g3_i6 165 184 CGAGAATCCGACTTGGAACG BLAST psRNATarget

Expression of miRNA 109


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)