Transcript | Ll_transcript_294666 |
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CDS coordinates | 1-2805 (+) |
Peptide sequence | AVLITVLSSLTFLYSKFQRPNTLLTFFIIPFPFPFIFSSFSLYTKVDQNMHSITKSFKSYNKHSRRFSLTKTTDSSSSDHENLPILLHQDNNHSNPSSAVSDNAEHESFDFRRQLQPSPEEDPPSRLIGKFLHKQRASGEFSLDMDLEMEELQEHYVVDGKMTPVEESPTMNNYRISRDVKVSFEEPASVVVEVANDDVSRSESSKDSPLIGEFQRPPQLDRRGGSPSGDGEVLRCTSNGSFERNVSMLRKSSLLKAKTRSRLLDPPEEPDRRSGRVPRSSQMFSGYVGKKGGDDEEDDPFLEDDFPDEYIKTHFSFWIFLEWLSLILIIGLLITTLSVPLLSNKNLWQLKLWKWEVMVLVLICGRLVSDWVIRVAVFFIERNFLLRKRVLYFVYGVKKAVQNCVWLGLVLIAWHFLFDKRVQRDSKSSFLEYVTRILVCLLVGTLVWLVKTLAVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLIELQKAEEEEQKLAEEVQKLQNAGATIPPGLRAATAFSTIKSGKLRSGALQKSPMISRPLSKKSDDGKGGITIDHLHKLNPNNVSAWNMKRLINMVRHGALTTLDEQILGSANEDENATQIRSENEAKAAAKKIFQNVARHGCRYIHVDDLMHFMRGDEAEKTLSLFEGASDSGKIGKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVILLIVIIWLLILQIASTKLFLFVSSQVVLVAFIFGNSCKTVFESIIFLFVLHPFDVGDRCEIDGVQMVVEEMNILTTIFLRYDNQKILIPNSVLATKAISNFYRSPDMGDAIEFCIHISTPIESISAVKHRIQSYIDNKKEHWHASPLIVFKDCEQLNMVRLAIWPTHKMNFQDMGERFARRSLLIEEMIKIFQELDMQYRLLPHDISIRSMPTTSDRLPPSWATITN* |
ORF Type | 5prime_partial |
Blastp | Mechanosensitive ion channel protein 6 from Arabidopsis with 57.86% of identity |
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Blastx | Mechanosensitive ion channel protein 6 from Arabidopsis with 57.16% of identity |
Eggnog | Mechanosensitive ion channel(COG0668) |
Kegg | Link to kegg annotations (AT1G78610) |
CantataDB | Link to cantataDB annotations (CNT0000406) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427954.1) |
Pfam | Mechanosensitive ion channel (PF00924.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer