miRNA 111 details

Id Micro111
SequenceCTCAGCAGTCGACTGTACCGTG 
Annotated namesosa-miR2865; 
Annotated pre-miRNANone

Targets of miRNA 111

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_58017; FTRINITY_DN57808_c0_g1_i3 549 570 GAAGGTACGGTTGGCTGCTGAT BLAST psRNATarget
Ll_transcript_58024; FTRINITY_DN57808_c0_g1_i6 393 414 GAAGGTACGGTTGGCTGCTGAT BLAST psRNATarget
Ll_transcript_58027; FTRINITY_DN57808_c0_g1_i7 393 414 GAAGGTACGGTTGGCTGCTGAT BLAST psRNATarget
Ll_transcript_58022; FTRINITY_DN57808_c0_g1_i5 393 414 GAAGGTACGGTTGGCTGCTGAT BLAST psRNATarget
Ll_transcript_267169; FTRINITY_DN55874_c1_g1_i6 273 294 TGAGGCAGAGTCGATTGCTGAG BLAST psRNATarget
Ll_transcript_267168; FTRINITY_DN55874_c1_g1_i5 669 690 TGAGGCAGAGTCGATTGCTGAG BLAST psRNATarget
Ll_transcript_267165; FTRINITY_DN55874_c1_g1_i3 926 947 TGAGGCAGAGTCGATTGCTGAG BLAST psRNATarget
Ll_transcript_50880; FTRINITY_DN58813_c3_g4_i1 326 347 AGAGGTAGAGTCCGCTGCTGAG BLAST psRNATarget
Ll_transcript_118646; FTRINITY_DN58231_c0_g2_i4 3199 3220 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_118649; FTRINITY_DN58231_c0_g2_i6 3199 3220 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_118647; FTRINITY_DN58231_c0_g2_i5 3199 3220 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_118643; FTRINITY_DN58231_c0_g2_i2 4878 4899 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_118645; FTRINITY_DN58231_c0_g2_i3 4981 5002 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_118660; FTRINITY_DN58231_c0_g2_i12 4878 4899 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_118658; FTRINITY_DN58231_c0_g2_i10 4981 5002 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_118641; FTRINITY_DN58231_c0_g2_i1 4878 4899 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_118664; FTRINITY_DN58231_c0_g2_i13 4981 5002 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_118659; FTRINITY_DN58231_c0_g2_i11 4981 5002 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_90398; FTRINITY_DN53914_c13_g1_i1 241 262 AACGGTAAGGTTGACTGCTGTG BLAST psRNATarget
Ll_transcript_133648; FTRINITY_DN76845_c0_g1_i1 286 307 CAAGGTAAGGTCAACTGTTGAG BLAST psRNATarget
Ll_transcript_209126; FTRINITY_DN52667_c0_g1_i5 111 132 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_209130; FTRINITY_DN52667_c0_g1_i9 608 629 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_209129; FTRINITY_DN52667_c0_g1_i8 608 629 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_209123; FTRINITY_DN52667_c0_g1_i2 708 729 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_209122; FTRINITY_DN52667_c0_g1_i1 608 629 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_209128; FTRINITY_DN52667_c0_g1_i7 883 904 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_209140; FTRINITY_DN52667_c0_g1_i18 708 729 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_209125; FTRINITY_DN52667_c0_g1_i4 883 904 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_209124; FTRINITY_DN52667_c0_g1_i3 1300 1321 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_209134; FTRINITY_DN52667_c0_g1_i13 1395 1416 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_209127; FTRINITY_DN52667_c0_g1_i6 1300 1321 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_209139; FTRINITY_DN52667_c0_g1_i17 1395 1416 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_174267; FTRINITY_DN52156_c0_g1_i3 1852 1873 GGGGGTGCAGTTGACTCCTGAT BLAST psRNATarget
Ll_transcript_174264; FTRINITY_DN52156_c0_g1_i1 2424 2445 GGGGGTGCAGTTGACTCCTGAT BLAST psRNATarget
Ll_transcript_174265; FTRINITY_DN52156_c0_g1_i2 2463 2484 GGGGGTGCAGTTGACTCCTGAT BLAST psRNATarget
Ll_transcript_273598; FTRINITY_DN54293_c4_g1_i11 5349 5370 GCGGGTGCAGTCTACTGTTGAT BLAST psRNATarget
Ll_transcript_190550; FTRINITY_DN56726_c4_g3_i8 594 615 ACTGGAGCAGTTGGCTGCTGAA BLAST psRNATarget
Ll_transcript_190544; FTRINITY_DN56726_c4_g3_i7 754 775 ACTGGAGCAGTTGGCTGCTGAA BLAST psRNATarget
Ll_transcript_190533; FTRINITY_DN56726_c4_g3_i2 754 775 ACTGGAGCAGTTGGCTGCTGAA BLAST psRNATarget
Ll_transcript_190535; FTRINITY_DN56726_c4_g3_i3 839 860 ACTGGAGCAGTTGGCTGCTGAA BLAST psRNATarget
Ll_transcript_190532; FTRINITY_DN56726_c4_g3_i1 976 997 ACTGGAGCAGTTGGCTGCTGAA BLAST psRNATarget
Ll_transcript_190540; FTRINITY_DN56726_c4_g3_i5 976 997 ACTGGAGCAGTTGGCTGCTGAA BLAST psRNATarget
Ll_transcript_190538; FTRINITY_DN56726_c4_g3_i4 1454 1475 ACTGGAGCAGTTGGCTGCTGAA BLAST psRNATarget
Ll_transcript_190542; FTRINITY_DN56726_c4_g3_i6 1454 1475 ACTGGAGCAGTTGGCTGCTGAA BLAST psRNATarget
Ll_transcript_40151; FTRINITY_DN47187_c0_g1_i1 772 793 TCCGGAACCGTTGATTGCTGGG BLAST psRNATarget
Ll_transcript_399837; TRINITY_DN51922_c2_g1_i3 491 512 GAAGGTACGGTTGGCTGCTGAT BLAST psRNATarget
Ll_transcript_399840; TRINITY_DN51922_c2_g1_i4 518 539 GAAGGTACGGTTGGCTGCTGAT BLAST psRNATarget
Ll_transcript_399828; TRINITY_DN51922_c2_g1_i2 117 138 TCAGGTACGGTTGGCTGCTGAT BLAST psRNATarget
Ll_transcript_467675; TRINITY_DN49240_c2_g1_i2 867 888 TGAGGCAGAGTCGATTGCTGAG BLAST psRNATarget
Ll_transcript_467676; TRINITY_DN49240_c2_g1_i3 867 888 TGAGGCAGAGTCGATTGCTGAG BLAST psRNATarget
Ll_transcript_467701; TRINITY_DN49240_c2_g1_i15 867 888 TGAGGCAGAGTCGATTGCTGAG BLAST psRNATarget
Ll_transcript_467674; TRINITY_DN49240_c2_g1_i1 867 888 TGAGGCAGAGTCGATTGCTGAG BLAST psRNATarget
Ll_transcript_467686; TRINITY_DN49240_c2_g1_i8 867 888 TGAGGCAGAGTCGATTGCTGAG BLAST psRNATarget
Ll_transcript_467685; TRINITY_DN49240_c2_g1_i7 867 888 TGAGGCAGAGTCGATTGCTGAG BLAST psRNATarget
Ll_transcript_467702; TRINITY_DN49240_c2_g1_i16 867 888 TGAGGCAGAGTCGATTGCTGAG BLAST psRNATarget
Ll_transcript_467692; TRINITY_DN49240_c2_g1_i11 867 888 TGAGGCAGAGTCGATTGCTGAG BLAST psRNATarget
Ll_transcript_451483; TRINITY_DN50647_c0_g2_i1 486 507 AGAGGTAGAGTCCGCTGCTGAG BLAST psRNATarget
Ll_transcript_397162; TRINITY_DN51931_c1_g1_i14 4776 4797 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_397160; TRINITY_DN51931_c1_g1_i12 4776 4797 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_397153; TRINITY_DN51931_c1_g1_i8 4776 4797 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_397152; TRINITY_DN51931_c1_g1_i7 4887 4908 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_397166; TRINITY_DN51931_c1_g1_i15 4887 4908 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_397157; TRINITY_DN51931_c1_g1_i10 4966 4987 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_397145; TRINITY_DN51931_c1_g1_i2 4887 4908 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_397168; TRINITY_DN51931_c1_g1_i16 4966 4987 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_397146; TRINITY_DN51931_c1_g1_i3 4966 4987 AGTGCAACAGTTGGCTGCTGAG BLAST psRNATarget
Ll_transcript_332932; TRINITY_DN4136_c0_g1_i1 14 35 AACGGTAAGGTTGACTGCTGTG BLAST psRNATarget
Ll_transcript_485267; TRINITY_DN52325_c0_g4_i1 300 321 CAAGGTAAGGTCAACTGTTGAG BLAST psRNATarget
Ll_transcript_413459; TRINITY_DN45670_c0_g1_i8 36 57 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_413456; TRINITY_DN45670_c0_g1_i5 123 144 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_413461; TRINITY_DN45670_c0_g1_i10 358 379 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_413452; TRINITY_DN45670_c0_g1_i1 1019 1040 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_413457; TRINITY_DN45670_c0_g1_i6 978 999 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_413453; TRINITY_DN45670_c0_g1_i2 1019 1040 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_413454; TRINITY_DN45670_c0_g1_i3 1109 1130 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_413458; TRINITY_DN45670_c0_g1_i7 1019 1040 GGTGGTAAAGTTGGCTGTTGAA BLAST psRNATarget
Ll_transcript_461747; TRINITY_DN51175_c3_g6_i1 39 60 TTTTGTGTAGTTGGTTGCTGAG BLAST psRNATarget
Ll_transcript_319278; TRINITY_DN46262_c0_g1_i5 1308 1329 GGGGGTGCAGTTGACTCCTGAT BLAST psRNATarget
Ll_transcript_319276; TRINITY_DN46262_c0_g1_i3 2707 2728 GGGGGTGCAGTTGACTCCTGAT BLAST psRNATarget
Ll_transcript_319279; TRINITY_DN46262_c0_g1_i6 2722 2743 GGGGGTGCAGTTGACTCCTGAT BLAST psRNATarget
Ll_transcript_319274; TRINITY_DN46262_c0_g1_i1 2984 3005 GGGGGTGCAGTTGACTCCTGAT BLAST psRNATarget
Ll_transcript_451095; TRINITY_DN50673_c2_g1_i1 726 747 ACTGGAGCAGTTGGCTGCTGAA BLAST psRNATarget
Ll_transcript_295305; TRINITY_DN51710_c0_g3_i1 759 780 TCCGGAACCGTTGATTGCTGGG BLAST psRNATarget

Expression of miRNA 111


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)