Transcript | Ll_transcript_398535 |
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CDS coordinates | 283-2727 (+) |
Peptide sequence | MDGSRGPESDAHMEDDHTSPKHEVLNAIEVSHNEGLSCSIDEAQVSNVISPQGSVGEPQVVDEEVQVSEELIETESSNHISHEVVQPTVSQLQPCTSQLSRPSLSSVEAYGADPAIGHHEIIEPFVCEGNPESGTSDVQIESQIFCDKVEIISKSAASDIPEPEKMLSLAYQHDGETNNNLPMESTPNNQGVSDDHTDPTGVKCISGNKRSFTESTLTMQSVDFIESYGGTQSKRTRESIPDDDDLLSSILDGRRSSVLKLKPSPVAPEIVSMKRPRSAPRTSALKRKVLMDDMMVLHGDTIRQQLTDTEDIRRIRKKAPCTRHEIFMIQRQSAEDEIFHEPIFTCLSADLTILRNVSFDLTGIKVCDNGLDTSFLGKTNDKESHSRTNTETHGVETNIETKALQLQGDAEAQPIGIPVFSESHQSEANLESHDLDVHGHANIVSHVGELDNSQNVEMNNAGRNIDVSVAENFSVGPGLESSSLTVSESNHCVPNDCVASVPVMDKTNVLVGSMHTDIPSMSTDQNLNTSAILEDEFVEEKCNKSEVDTIEITEHSVEIRTQVQTDGLEANNLCASMVTGFKETNEYNDNRASFNGDLPLEDNGNSMPRGLSEDQSVASDFGSMGCDGKDSRSGPIFSENTKVDCLDTVVTVLDEKETSLNEGNPVCEEAGQHSVALGLDEKETILNEGNPVCVEAGLESTSLFPEIPAIESPFVDRNDENVIHANDYDTGFLNVGDDEIIEDDDFMPCAEESSLENSGWSSRTRAVAKYLQISFEKEDLHGRQNLCLDNILAGKTRKEASRMFFETLVLKTKDY |
ORF Type | 3prime_partial |
Blastp | Sister chromatid cohesion 1 protein 4 from Arabidopsis with 54.59% of identity |
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Blastx | Sister chromatid cohesion 1 protein 4 from Arabidopsis with 54.15% of identity |
Eggnog | Doublestrandbreak repair protein rad21(ENOG410XRB4) |
Kegg | Link to kegg annotations (AT5G16270) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449918.1) |
Pfam | Conserved region of Rad21 / Rec8 like protein (PF04824.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer