Protein coding transcript 113657

TranscriptLl_transcript_397374
CDS coordinates596-4285 (+)
Peptide sequenceMEDENWGGNGGGLGRDGKYDLISWAHEFSFIASMPCKTAEERQVRDRKAFLLHSLFVDVAIFRAIKAVKHVMEEPDLNCSISESNILYTETVGHLSIEVTKDATVASCKVDTKVDGVKATGVNQKDLLARNLLKGITADENTAAHDITTLGVINVRYCGYVAYVKVEGGENDNFDSSSYQNTEFLDQLEGGANALNINSLRLLLNTTQSENSRPVTEIQTLENEELGASHAFVERLIKESLSKLEEEETGLDNFVRWELGACWLQHLQDQNNTEKDKKPSLDKAKNEMKVEGLGKHLKALKNNKIKSDLTDLKSASENSKPPHVCVNREAESASLLSAESQYETTTAENELVLKGMLSEAAFTRLKESGTGLHRKSIQDLIDLSQKYYIDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRIRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILQAVIAVVDKEKVATTIAGALNLLLGVPENRESDKPCKTHPLVWKWLEVFLKKRFDWDVSNLNYNDVRKFAILRGLCHKVGIELVPRDIDMDSRIPFHKSDIVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGAKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNKRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVPDLLDYINPNHEAKGRDVAVKRRSQITKARTKSSLNIGSTSSDESLKETPEKTSEEAIFIPVPGGSANAEQETNSAPESEQPVLEKTSDKKQQISGNSSDAHADGEDGWQPVQRPRSSSSYGQQRKQRRATVNKVYYQKKNVESDTDHPSVRSTDQNGRYYFSTKRTISRGSYTDNHTVNAGQGSKFGRKVIKAATYRVKSVSVVTDTTPKDTQEISDQLFNSNSEELGSNSSSNDVNPVKTSTVSLGKSPSYKEVALAPPRTISKLQVCSPQSDIPVSDDLGVGKHEEEVTEGYATANPTLGEVNNIFEHKDKDFSEKKEETQLTDAAHDNFDRSEGLDSGAVEDHETADNIIMIDAVKDHVDSHKLELNTSILPNDDANIISQEGEDLRVSISPSAKKLSASAA
ORF Type3prime_partial

Annotations of Ll_transcript_397374

BlastpProtein TSS from Arabidopsis with 53.85% of identity
BlastxProtein TSS from Arabidopsis with 53.06% of identity
EggnogInvolved in proper cytoplasmic distribution of mitochondria (By similarity)(ENOG410XQUQ)
KeggLink to kegg annotations (AT4G28080)
CantataDBLink to cantataDB annotations (CNT0001002)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019418832.1)
PfamTranslation initiation factor eIF3 subunit 135 (PF12807.6)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer