Protein coding transcript 114478

TranscriptLl_transcript_399267
CDS coordinates82-3060 (+)
Peptide sequenceMDDSLYDEFGNYIGPEIDSDFDSDREEDNDDDGEDTRDRLTNNHDGAASDGEGPANGWITTSNDIDMVDNQVVLAEDKKYYPTAEEVYGEDVETLVMDEDEQSLEQPIIKPVRNIKFEVGVKDSSTYVSSQFLLGLMSNPTLVRNVALVGNLQHGKTMFMDMLVEQTHRMCTFDPQSEKHMRYTDTRVDEQERRISIKAVPMSLVMEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAVLIVDAAEGVMVNTERAIRHAIQERLPIVVVMNKVDRLITELKLPPKDAYHKIRHTLEVINNHISAASSIAGDVQVIDPVAGNVCFASGTAGWSFTLQSFAKLYGKIHGIPLEANKFASRLWGDFYYHPDTRTFKKKPPASGAERSFVEFVLEPLYKIYSQVIGEHKKSLETTLAELGVTLSNAAYRLNVRPLLRLACSSIFGAASGFTDMLVQHIPSPRDAAIKKVDHIYTGPKDSVIYKAMSQCDSSGPLMVNVTKLYPKSDCSVFDVFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMTVKEVTKLWVYQARDRMPIAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLQFNTLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSTDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDAKIAPEPLHRGSGQIIPTARRVAYSSFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFCLSIFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSIGKFFDEAMMVELAQQAADLHQQMM*
ORF Typecomplete

Annotations of Ll_transcript_399267

Blastp110 kDa U5 small nuclear ribonucleoprotein component CLO from Arabidopsis with 84.45% of identity
Blastx110 kDa U5 small nuclear ribonucleoprotein component CLO from Arabidopsis with 85.28% of identity
EggnogCatalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)(COG0480)
KeggLink to kegg annotations (AT1G06220)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019463083.1)
Pfam116 kDa U5 small nuclear ribonucleoprotein component N-terminus (PF16004.4)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


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