Protein coding transcript 115858

• Transcript: Ll_transcript_472113
• CDS coordinates: 110-2737 (+)
• Peptide sequence: MMIVEKDKMSAPSSRERAQRLYEKNLELENKRRRSALPSDPNAWSQIRDNYEAIILEDHAFSEKHNIEYALWQLHYKRIEELRAHLNAALTSISSKSSQGGKGQVRPDRVTKIRLQFKTFLSEATGFYIDLIMKIRAKYGLPLGYFEDSENQIVMEKDGKKSAEMKKGVISCHRCLIYLGDLARYKGLYGKGESIKREFAAASSYYLQAASLWPSSGNPHHQLALLASYSGDEVGTIYRYFRSLAVDSPFTTARDNLIVAFEKNRQNYSQLCGDVKALAAKESSGHLTGKGRGKVEAKLATGGTGVEACPKKEGVSNIQEAYKSFCTCFVRLNGILFTRTSLETFSEVLSLVSTGLHKLLSSGQNEELNFGMDTVENGLAIVRIVSITIFTVHSVNKESESQTYAEIVQRAVLLQNAFTAAFELMSFIVERCIQLQDPSSSYLLPGILVFVEWLACYPDFAAGNNVDEKQAIVRSKFWVHCISFLNKLLSVGPMSIEDDEDEACFNNMSRYEEGETENRVALWEDIELRGFVPLLPAQTILDFSRNHSLGSGGEKERKARVKRILAAGKVLANVVRIDQKMIYFNSKGKNFTIGVEPQVSDDFVLAPYSAIPDAEELLKENTADKTKVGIAQPDQQDDDEVIVFKPIVAEKRADAMVVSSRVPYEGFESVSTAFGGDMKFHINSASNSLNNVNHQTSLPPSVSSMLPQHLPSVQPHSLRWLEEEITLPNSLKSLRFSENGHAVQSDLPLQAVSISNHTALPVPTHQPVSAGTNMLRGLSKAEDFVISSKVDAIIPSGFFTDNSVIKTSSALQASLKKSPVSRPSRHLGPPPGFSLVPPRQDIEPTVSDLISRNPIMDDYSWLDGYQLPPPTKGLGP
• ORF Type: 3prime_partial

Annotations of Ll_transcript_472113

• Blastp: Protein SMG7 from Arabidopsis with 53.87% of identity
• Blastx: Protein SMG7 from Arabidopsis with 53.87% of identity
• Eggnog: homolog, nonsense mediated mRNA decay factor (C. elegans)(ENOG410XR9Z)
• Kegg: Link to kegg annotations (AT5G19400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455933.1)
• Pfam: Telomerase activating protein Est1 (PF10374.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;