Transcript | Ll_transcript_474574 |
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CDS coordinates | 1-3360 (+) |
Peptide sequence | ANSGGGHLEIVEGAYSWGFDIRNWHKHLNRLTWPEIFRQLALSAGYGPQLKKGSITWPCSNDKDEGRNIEEIISTLRNGSAAEKAVAKMRHRGLLAPLKSRHRLTPGTVKFAAFHALSIEGSKGLNVLELAEKIQKFGLRDLTTSKTPEASISVALSRDTKLFERIAPSTYRVRSAFVKDPIDAESIMIEARKKIQIFENGFIAGEGADDVEREEDSESDEADENPEVDDLVNPSSSKRTSELLDDFSSNGIGNLGDNVELIQDEFDKDPLCFPDNVSKSADCPIAVVGLPAAFVDRNAGNIDEDNFEIDESKRGASWVQGLTEGEYSDLSVEERLNALVVLVGMANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKVRSKDDYISKSDFPSTNGNKVETQYTCPVVESNQSPLFDINIDNNNEASPLTAENQKTPAAQSLSFQPWLVHDPCTSQANRQAQLSAQYSKRSCSQLKSYISHIAEEMHVYRSLPLGQDRRRNRYWQFVACASCNDPGAGRIFVEYLDSKWMLIDSEEAFDALLNSLDLRGIRESHLRLMLQKIENSFKENVRKNARVEVGSICETSIKNEADETGSSPDRHAGSDSPSSTLCGLNSDTSETSSSFKIELGESESEKKAALKRYQDFQKWMWRECYKSSMLCAVKSGKRRCKRQVDICDTCLNPYFFEDSHCDCCHQSFPSNNGFNFSKHAFQCGDKLFKDICVLDSGLPLRIRLLKALVAFIEASVPPEALKSIWTEDIRRDWGLKLIKSSSVEELLKLLTLFERALQRDFLSSNFSTTEELLGSSSLSQSAAHASDPEPVALLPWIPLTTPAVCLRLFEFDASVSYMHVDKPDSCQEKEAREYIKLPSRYSPFKSSRVAEPSDLDHDEFMKVKSAPMKIVQSGNKRRRVTDGKGRRRKLSKGMHGSKQDTGRHIVKVTENPSQRLKQQGLASQVKGGGSGQRTVRKRRVDKRAVEDLLLGNTAAGHSNKISRVPMRSMDVGWEVNKASPITHVHMDVADNSNSTEEVESDDNAAAVEYDKGNWEIGFSGVAPHNRWSNDLVGMSDEDVDASEDDNDNSLDEQEEEYSEVDVMSEGSDGIANRAVVNEDSDSAVSEDSSD* |
ORF Type | 5prime_partial |
Blastp | Homeobox-DDT domain protein RLT1 from Arabidopsis with 48.95% of identity |
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Blastx | Homeobox-DDT domain protein RLT1 from Arabidopsis with 47.14% of identity |
Eggnog | DDT domain(ENOG4111F53) |
Kegg | Link to kegg annotations (AT1G28420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416979.1) |
Pfam | HB1, ASXL, restriction endonuclease HTH domain (PF05066.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer