Transcript | Ll_transcript_431329 |
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CDS coordinates | 71-5887 (+) |
Peptide sequence | MENQTNHETSEQPNNETEEQAELQEHDEEDDSKKEEEELVAKVNKLMDKITASPDNPKPTVLHALASILETQESRYMEENDHSSSSNGRAAHSIGRLGSIIRENDEFFELISSKFLSESRYSISVQVASARLLLCCSLTWIYPHVFEEPVIENIKDWVMDESARVSAEDQSLKHHPRKREASDSEMLKTYSTGLLAVCLIGGGQVVEDVLTSGLSAKLMRYLRLRVLGDTSSTQKDIGHSTEGRHATGNSSLRSRDDGRSRFRHLIEASRLDDTRMIDERSLEDQIHERVPDRNIGEQNFPDNSWVGGDPPDGLGEDADICEVDAVGEDRWHSLDARDGRIKHGEHDDNVNDSSRRRTKWARSRGKTRVNESTIESEPVLSSPGSGSRLGQGRSVRDRSISRNADARKVPDSKKTHVRATTETSLLEREDNDDCFQECQIGSKDISDLVRKAVRAAEAEARSANAPEEAVKAAGDAAADLVKTAASEEFKSSNDEEAAVLAASRAASTVIDAASAVELSRSSIGINSETESVSCRETDSGEDLEDFFIPDTQSLSKLREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLALLQQNSKHQEASKVALLLPDVMKMICALAAHRKFAALFVDRGGIQKLLAVPRMTQTFFGLSSTLFTIGSLQGIMERVCALPSDVVYHVVQLALQLIDCNQDQARKNAALFFAAAFVFRAVLDAFDSQDGLQKLLGLLNDAALVRSGVNSGALGLSNTGSLRNDRSPAEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKNNRSTARNIPSVRAVYKPLDISNEAIDAVFLQLQKDRKLGPAFVRTRWPPVEKFMASNGHVTMLELCQAPSVERYLHDLLQFALGVLHIVTLVPSSRKVIVNTTLSNNRVAIAVILDAANIVGSHVDPEIIQPALNVLVNLVCPPPSISNKPTVFTQGQQFPSAQITNGPPSETRDRTAQSSQIDPRERNGETSTAVLSAQNVNSNPQTPGSTTASGLVGDRRISLGAGAGSAGLAAQLEQGYRQSREAVRSNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAQILTKLQVGKKLSELIRDSGSQTPGTEQGRWQAELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHARELLLLVHEHLQASGLSHTASMLLKEAQLTPLPSLIAPSSLAQQPNTQEASSIQIQWPSGRTAGFLTNKLKINARDEEPSLKIGSVSAKKKSLSFSASFGTHSRHQLVDSLLSPGRKCFGTVTESSETSIVGTPSESSVKHYVDAGSTKTPMFPMKRKLSDVKDIAMLSSSGKRLNVGDQGLRSPICSSSIRKSSLQTDAVGFFTPISNLRSQQNRCTADSVDDNQYSISNPGQMIPSCQVFNELQLNNPERITLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVTARLGTREYKSLYGGVHGNRRDRQFVYSRFRPWRTCRDDAGDLFTCITFVGDSSHIAVGSHNGDLKFFDSNNSNVVESYTGHQNPLTLVQSFVSGDNQLLLSSSSQDVKLWDATSILNGPTHSFEGCKVARFSNSGNVFASLPSESARREILLYDIQTCLLESKLTDPLEASTGRSHVYSLIHFSPSDSMLLWNGVLWDRRVSGPVHRFEQLTDYGGGGFHPAGNEVIINSEVWDLRKFRLQRSVPSLDQTSITFNACGDVMYAILRRNLEDVMSTVHNTRRGKHPLYAAFRTLDAINYSDIATIPVDRCVLDFASEPTDSFVGLVTMDDQDEMYASARIYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDDIDVDPLLGPGFGGDSESDGDDMSNDEDDDDDEDIISDIDGEDADFLLDDVDFDGENEMFEIASGDEDDDDSQGYETLSSDEEDYVNNRNRFGY* |
ORF Type | complete |
Blastp | DDB1- and CUL4-associated factor homolog 1 from Arabidopsis with 57% of identity |
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Blastx | DDB1- and CUL4-associated factor homolog 1 from Arabidopsis with 56.74% of identity |
Eggnog | Vpr (HIV-1) binding protein(ENOG410XR8C) |
Kegg | Link to kegg annotations (AT4G31160) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416933.1) |
Pfam | LisH (PF08513.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer