Transcript | Ll_transcript_487582 |
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CDS coordinates | 1-1617 (+) |
Peptide sequence | KQDHSGEQLANTNVSPASGMEQSNGRTSIGNASGPAATPSRTGNVSVEGGHDLPSEVGDCTRHGTSTNGAVTEGIGVNRHKEVSVQHFKGDREEGELSPNVDFEEDNFRVYGDGSSDVLHKAKNGGLSQQYQNRHREEAFGEAKGENYANADDEGEESRHRSSGDIGNASVNDVSGSESAGGEDCSREDHEDGEHDNKAESEGEAEGMGDAHDVEGDGTSLPLSEHFLLTVKPLAKHVPPVLHVKEWNSQVFYGTDSFYVLFRLHQTLYERIRSAKINSSSAERKWGASNDTNSRDQYDRFMNALYNLLDGSSDNAKFEDECRAIIGTQSYLLFTLDKLIYKLVKQLQAVATDEMDNKLLQLYAYEKSRKPGRFFDVVYHDNARVLLHDENIYRIEYSPGPMQMSIQLMDHGHDKPEVTAVSVDPNFSAYLHNNFLSVVPDNKEKSGIFLKRNKRRYAHDDEFSSQVMEELKVVNGLECKIACSSSKVSYVLDTEDFLVRMRRKRRALHPKSSCHEQAKSSSIFSRRVQRLRRLFSSQ* |
ORF Type | 5prime_partial |
Blastp | Paired amphipathic helix protein Sin3-like 4 from Arabidopsis with 53.23% of identity |
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Blastx | Paired amphipathic helix protein Sin3-like 3 from Arabidopsis with 54.17% of identity |
Eggnog | Paired AMPhipathic helix protein(COG5602) |
Kegg | Link to kegg annotations (AT1G70060) |
CantataDB | Link to cantataDB annotations (CNT0002810) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445511.1) |
Pfam | C-terminal domain of Sin3a protein (PF16879.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer