ta-siRNA 12 details

ID12
SequenceATTGAAATCTCTGTTTAAATTATG 

Targets of siRNA 12

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_155275; 528 551 CATAATTAAAACAGAGATTTCAAT BLAST
Ll_transcript_2024; 542 569 AATATCTATTGCAAACAGAGATTTCAAT BLAST
Ll_transcript_2009; 587 614 AATATCTATTGCAAACAGAGATTTCAAT BLAST
Ll_transcript_447852; 528 551 CATAATTAAAACAGAGATTTCAAT BLAST
Ll_transcript_368714; 696 719 CATAATTAAAACAGAGATTTCAAT BLAST
Ll_transcript_368710; 696 719 CATAATTAAAACAGAGATTTCAAT BLAST
Ll_transcript_440946; 257 280 TATAATTTAAACAGGGATTTCAAT BLAST
Ll_transcript_368711; 53 76 TATAATTTAAACAGGGATTTCAAT BLAST
Ll_transcript_472742; 1713 1734 CATTTTAAACAGATATTTCAAG BLAST
Ll_transcript_472739; 2002 2023 CATTTTAAACAGATATTTCAAG BLAST
Ll_transcript_354999; 826 853 AATATCTATTGCAAACAGAGATTTCAAT BLAST
Ll_transcript_92719; 1275 1301 CATTCCTTTTTGGACAGAGATTTCAGT BLAST
Ll_transcript_525879; 565 591 CATTCCTTTTTGGACAGAGATTTCAGT BLAST
Ll_transcript_525889; 565 591 CATTCCTTTTTGGACAGAGATTTCAGT BLAST
Ll_transcript_92719; 1275 1301 CATTCCTTTTTGGACAGAGATTTCAGT BLAST

Expression of siRNA 12


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)