Transcript | Ll_transcript_486016 |
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CDS coordinates | 3-2564 (+) |
Peptide sequence | EAKGPQTRNAARRKAALDKEAQMKPVNGDSTSEDEDLDISHVEIDEALMIDDDDDISDDDDDDDHEDILSDVSLPVCLPDKVHDVKLDDSAEDSIVAPVTSDGQTDAASGSSTKVGTAKRSDTAVFRGGYSSSSRGALSFAAAAMAGLGSVNTRGIRGGRDRHGRPLFGGSNDPPKLIFNAGGKQLNRHLTIYQAIQRQLVVDEDEEERFADNDFVSNEGSRLWGDIYTITYQRAENQTDRASAGGSILNVSKTGKSGSSSNSSSEAKLHQISVLDSILQGELPCELEKSNPTYNILALLRVLEGLNQLAPRLRAQVVIDSFAVGKTSDLDELGVTSGARVPPEEFISSKLTPKLARQMQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALHRLQQQQGADGNGSTNEREVRVGRLQRQKVRVSRNHILDSAAKVMEMYSSHKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKAGLQMWRSDSSEKYQMEIDGNEKKSKSIDSSFAGDGELVQSRLGLFPRPWPASSNASEGTPFYKVIEYFRLVGRVVAKALQDGRLLDLPLSVAFYKLVLGQELDLHDILVIDAELGKTLQELNAIVCRKSYLESGGSYTDKIANLHFRGAPIEDLCLDFTLPGYPEYVLKPGDEIVTINNLEEYISMVVDATVKTGIMRQIEAFRAGFNQVFDISSLQIFTPQELDYLLCGRREMWKAETLVDHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRSFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSTAANVSSNGNGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAISEGQGSFDLS* |
ORF Type | 5prime_partial |
Blastp | E3 ubiquitin-protein ligase UPL3 from Arabidopsis with 69.6% of identity |
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Blastx | E3 ubiquitin-protein ligase UPL3 from Arabidopsis with 69.48% of identity |
Eggnog | ubiquitin protein ligase(COG5021) |
Kegg | Link to kegg annotations (AT4G38600) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450983.1) |
Pfam | HECT-domain (ubiquitin-transferase) (PF00632.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer