Transcript | Ll_transcript_487316 |
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CDS coordinates | 38-790 (+) |
Peptide sequence | MDSSGVAATGGGGGGGGGGGGGFHGYRKLPNNTTISGLKLSVGGGENINNQSAAAAATEDNECMVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTIYLHRYRELEGDRSSMRGEALGKRSSSSGSGSVEYGTLGVATAFVPQFHHHHHHHHSNGYYDHAAAAVMGNYMRDAASNNHSNNTNNAASKAATITNADQPI* |
ORF Type | complete |
Blastp | Nuclear transcription factor Y subunit B-6 from Arabidopsis with 62.44% of identity |
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Blastx | Probable acetyl-CoA acetyltransferase, cytosolic 2 from Arabidopsis with 77.78% of identity |
Eggnog | Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling(COG2036) |
Kegg | Link to kegg annotations (AT5G47670) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434947.1) |
Pfam | Core histone H2A/H2B/H3/H4 (PF00125.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer