Protein coding transcript 120674

TranscriptLl_transcript_487316
CDS coordinates38-790 (+)
Peptide sequenceMDSSGVAATGGGGGGGGGGGGGFHGYRKLPNNTTISGLKLSVGGGENINNQSAAAAATEDNECMVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTIYLHRYRELEGDRSSMRGEALGKRSSSSGSGSVEYGTLGVATAFVPQFHHHHHHHHSNGYYDHAAAAVMGNYMRDAASNNHSNNTNNAASKAATITNADQPI*
ORF Typecomplete

Annotations of Ll_transcript_487316

BlastpNuclear transcription factor Y subunit B-6 from Arabidopsis with 62.44% of identity
BlastxProbable acetyl-CoA acetyltransferase, cytosolic 2 from Arabidopsis with 77.78% of identity
EggnogCore component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling(COG2036)
KeggLink to kegg annotations (AT5G47670)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019434947.1)
PfamCore histone H2A/H2B/H3/H4 (PF00125.23)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer