ta-siRNA 121 details

ID121
SequenceAGGGGATCAAGTTACTCAAAGAGT 

Targets of siRNA 121

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details
Ll_transcript_226987; 58 81 ACTCTTTGAGTAACTTGATCCCCT BLAST
Ll_transcript_71147; 25 48 ACTCTTTGAGTAACTTGATCCCCA BLAST
Ll_transcript_131270; 12 35 ACTCTTTGAGTAACTTGATCCCCA BLAST
Ll_transcript_131269; 12 35 ACTCTTTGAGTAACTTGATCCCCA BLAST
Ll_transcript_114738; 24 47 ACTCTTGGAGTAACTTGATCCCCT BLAST
Ll_transcript_63115; 117 140 ACTATTGGAGTAACTTGATCCCCT BLAST
Ll_transcript_22359; 140 163 ACTCTTTGAGTAAGTTGATCCCCT BLAST
Ll_transcript_222793; 93 116 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_116058; 19 42 ACTCTTGGAGTAACTTGATCCCCC BLAST
Ll_transcript_238959; 47 70 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_238963; 85 108 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_223371; 32 55 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_139950; 42 65 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_181875; 11 34 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_50478; 30 53 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_142088; 37 60 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_236501; 20 43 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_67037; 177 200 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_120519; 41 64 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_87366; 56 79 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_227293; 521 544 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_211230; 50 73 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_164403; 463 486 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_8656; 23 46 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_8679; 23 46 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_8678; 23 46 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_71762; 107 130 ATTCTTGGAGTAACTTGATCCCCC BLAST
Ll_transcript_129266; 85 108 ATTCTTAGAGTAACTTGATCCCCA BLAST
Ll_transcript_8694; 73 96 GCTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_71166; 129 152 ACTCTTTGAGTAACTTGATCCTCA BLAST
Ll_transcript_93053; 104 127 ACTCTTTGAGTAACTTGATCCCTC BLAST
Ll_transcript_93068; 59 82 ACTCTTTGAGTAACTTGATCCCTC BLAST
Ll_transcript_273295; 252 275 ACTCTTGGAGTAATTTGATCCCCT BLAST
Ll_transcript_137284; 16 39 ACTCTTGGAGTAATTTGATCCCCT BLAST
Ll_transcript_269336; 1965 1988 ACTCTTGGAGTAACTTGATTCCCT BLAST
Ll_transcript_269332; 2425 2448 ACTCTTGGAGTAACTTGATTCCCT BLAST
Ll_transcript_197096; 90 113 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_106791; 4 27 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_182150; 202 225 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_213516; 154 177 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_137241; 31 54 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_69251; 67 90 ACTCTTGGAGTAAATTGATCCCCT BLAST
Ll_transcript_55244; 128 151 ATTTTCTGAGTAACTTGATCCTCT BLAST
Ll_transcript_104716; 2870 2893 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_104714; 2950 2973 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_104726; 2957 2980 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_104715; 3037 3060 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_458326; 78 101 ACTCTTTGAGTAACTTGATCCCCT BLAST
Ll_transcript_431213; 223 246 ACTCTTTGAGTAACTTGATCCCCA BLAST
Ll_transcript_431220; 223 246 ACTCTTTGAGTAACTTGATCCCCA BLAST
Ll_transcript_363220; 131 154 ACTATTGGAGTAACTTGATCCCCT BLAST
Ll_transcript_405979; 1106 1129 ACTATTGGAGTAACTTGATCCCCT BLAST
Ll_transcript_319619; 125 148 ACTCTTTGAGTAACTCGATCCCCT BLAST
Ll_transcript_516612; 43 66 ACTCTTTGAGTAAGTTGATCCCCT BLAST
Ll_transcript_445515; 24 47 ACTCTTGGAGTAACTTGATCCCCC BLAST
Ll_transcript_309792; 68 91 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_313529; 8 31 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_338350; 33 56 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_365284; 156 179 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_466776; 40 63 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_483456; 123 146 ACTCTTGGAGTAACTTGATCCCCG BLAST
Ll_transcript_466132; 182 205 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_353830; 114 137 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_483463; 123 146 ACTCTTGGAGTAACTTGATCCCCG BLAST
Ll_transcript_466790; 63 86 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_508737; 36 59 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_294911; 44 67 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_287373; 47 70 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_294925; 44 67 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_287360; 47 70 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_410241; 30 53 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_410267; 30 53 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_408875; 12 35 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_287363; 47 70 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_410255; 30 53 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_410222; 30 53 ACTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_308884; 641 664 ATTCTTAGAGTAACTTGATCCCCA BLAST
Ll_transcript_408855; 24 47 CCTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_408841; 24 47 CCTCTTGGAGTAACTTGATCCCCA BLAST
Ll_transcript_455108; 99 122 ACTCTTTGAGTAACTTGATCTCCA BLAST
Ll_transcript_431212; 109 132 ACTCTTTGAGTAACTTGATCCTCA BLAST
Ll_transcript_405131; 120 143 ACTCTTTGAGTAACTTGATCCCTC BLAST
Ll_transcript_405122; 120 143 ACTCTTTGAGTAACTTGATCCCTC BLAST
Ll_transcript_405129; 120 143 ACTCTTTGAGTAACTTGATCCCTC BLAST
Ll_transcript_303637; 55 78 ACTCTTTGAGTAACTTGATCCCAC BLAST
Ll_transcript_329499; 55 78 ACTCTTGGAGTAACTTGATTCCCT BLAST
Ll_transcript_423067; 37 60 ACTCTTGGAGTAATTTGATCCCCT BLAST
Ll_transcript_313528; 1219 1242 ACTCTTGGAGTAATTTGATCCCCT BLAST
Ll_transcript_313534; 1267 1290 ACTCTTGGAGTAATTTGATCCCCT BLAST
Ll_transcript_313533; 1279 1302 ACTCTTGGAGTAATTTGATCCCCT BLAST
Ll_transcript_313515; 1968 1991 ACTCTTGGAGTAATTTGATCCCCT BLAST
Ll_transcript_313530; 2045 2068 ACTCTTGGAGTAATTTGATCCCCT BLAST
Ll_transcript_313526; 2129 2152 ACTCTTGGAGTAATTTGATCCCCT BLAST
Ll_transcript_313520; 2294 2317 ACTCTTGGAGTAATTTGATCCCCT BLAST
Ll_transcript_313516; 2371 2394 ACTCTTGGAGTAATTTGATCCCCT BLAST
Ll_transcript_313531; 2455 2478 ACTCTTGGAGTAATTTGATCCCCT BLAST
Ll_transcript_328194; 95 118 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_450557; 14 37 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_277737; 192 215 ATTTTCTGAGTAACTTGATCCTCT BLAST
Ll_transcript_507904; 24 47 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_429775; 62 85 ACTCTTGGAGTAAATTGATCCCCT BLAST
Ll_transcript_459796; 42 65 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_461263; 69 92 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_485929; 1176 1199 ACTCTTGGAGTAAATTGATCCCCT BLAST
Ll_transcript_521068; 1579 1602 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_436897; 20 43 ACTCTTGGAGTAAGTTGATCCCCT BLAST
Ll_transcript_436894; 20 43 ACTCTTGGAGTAAGTTGATCCCCT BLAST

Expression of siRNA 121


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)