Transcript | Ll_transcript_348712 |
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CDS coordinates | 1-2340 (+) |
Peptide sequence | VVDIRVPMTKYMVGIQKGIVEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVKRQLDPIWHTLGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVYHLVRSDGIKLDGLSKSAKNKKRKVKGDNKDTEEGVDGASSTNSNAGLVLEEVLEEAPKWKVLREVLEEVEEERQKQGALREEVLAEGEDTDNGIVLVACKDERSCFQLEECITNSPKKVMSEEWKKYLLSKVQLRDIVHNKKNKPKDPKGFGILDGVTPITPAQNADTSSISKQEHDALLAAASGLKDFAKNDHVEDPSLPDFGGRGRGKGKRKIGSKNGPIVVDGSGVQNSNKKASTSDKFGKCDSKNEAHVDEASPASSGRFHEIMHGGTSVDNIVLRKHTNTDAAALNAKPLPPVHFYAIESDQPILDILKPSIIIVYHPDMAFVREIEVYKADNPSKRLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQSGHSTLESDLNTPQNSITRKAGGRKEANKEMQVIVDMREFMSSLPNVLHQKGMHIIPVTLEVGDYILSPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAMRVGVPSEEGVVENDVRAENYNTWAVEFLRRLPGVTDSNYRTIMDGCKSLAELALLPVEKLAELMGGHKAARTLRDFLDAKYPTLL* |
ORF Type | 5prime_partial |
Blastp | DNA repair endonuclease UVH1 from Arabidopsis with 67.13% of identity |
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Blastx | DNA repair endonuclease UVH1 from Arabidopsis with 67.05% of identity |
Eggnog | Excision repair cross-complementing rodent repair deficiency, complementation group 4(COG1948) |
Kegg | Link to kegg annotations (AT5G41150) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421212.1) |
Pfam | ERCC4 domain (PF02732.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer