Transcript | Ll_transcript_348630 |
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CDS coordinates | 254-2017 (+) |
Peptide sequence | MSRIFSRWKKVKEMPSLSDTHFAFSLNNRCLNRTGFKFNQVCPISTHLKNYKLHIISAHRRREPLVGVQERYKWDRSGSDDIVNPTRKIRVESNCPRCTKDMNLIFSNNHFPPPDSNSGFESFDSNLASPIETEDGGGYQSVNICPNCKSAYHFRPNSTAPLQGTFVEIGRGSDNNNSIVKSRNSKVPRRITHSKGSSSSSGKSGSVVGGDYELKRASNWLEVTVWDNIRSAKVTGHDNGEPPESCPPPPPGGNDGNGLAVHNPPGPPFVPGVNVIRHTGPREGGAGSGRGGEGNGEKTTWGGSNLGKDLPSPKEICKGLDKFVIGQDRAKKVLSVAVYNHYKRIYHADKQKGSGPDSGILEGLDDDDVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFIIADATTLTQAGYVGEDVESILYKLLAAADFNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKNPRGDSIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGLTDSAVVSSLLESVESSDLIAYGLIPEFIGRFPILISLTALTEDQL |
ORF Type | 3prime_partial |
Blastp | CLP protease regulatory subunit CLPX3, mitochondrial from Arabidopsis with 55.67% of identity |
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Blastx | CLP protease regulatory subunit CLPX1, mitochondrial from Arabidopsis with 84.48% of identity |
Eggnog | ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (By similarity)(COG1219) |
Kegg | Link to kegg annotations (AT1G33360) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453239.1) |
Pfam | AAA domain (Cdc48 subfamily) (PF07724.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer