Transcript | Ll_transcript_506689 |
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CDS coordinates | 209-5869 (+) |
Peptide sequence | MVSPKQLLSTLESTLLGPSPPTAAQRVELLHAIRTSSRSFQSLLSYSDPKSSDLSQVQSKSVRLPDSSPISLDDQDVQIALKLSDDLHVNEVDCVRLLVSANQEWGLMGRGPLEILRLAAGLWYTERRDLITSLHLLLRAVVLDQGLEDDILVDIQKYLEHLINSGLRQRLISLIKELNREDSSGLGGPQCEPYILDSRGSLVERRAVVSRERLIIGHCLVLSVLVVRTSPKDVKDIFSVLKDCASEVSVCNTTVKHQITFSLLFALVVAFVSDGLSTVPDKASILSSDASFRREFHELVMATGNDPVVEGFIGGIRLAWVVHLMLIQDGVAARETVSSGSSNEMGYLSQCLDVIFSTNSFQFLLDKVLHTASYQNEDEDMIYMYNAYLHKLITCFLSNSLARDKIKESKERTMSVLSPYRVVGSHDFAQDRNSSSQHGSDMGALTFNSILDFVSEIYQKEPELLSGNDVLWTFVNFAGEDHTTFQTLVAFLNMLSTLASSQEGASKVYELLQGKAFRSIGWSTLFECLTIYDDKFKQSLQTAGAMLPDIQEGDAKALVAYLNVLKKVVENGNPIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIATFIHVSPVLKDSIWTYLEQYDLPVVVGTNVQNTQQPVGTQVYDMQFELNEIEARREQYPSTISFLNLINALVAEERDLSDRGRRFIGIFRFIYDHVFGPFPQRAYADPCEKWQLVGACLQHFRMILTMYDVKDEDFEGIVDQSRLSTTKESSPLQTQLPVLELLKDFMSGKTAFRNIMGILLPGVNSIIAERSSQIYGQLLENAVQLSLEIIILVLEKDLLLSDYWRPLYQPLDIILSHDHSQIVALLEYVRYDFQPKVQQSSIKIMSILSSRMVGLVQLLLKSGAANSLIEDYAACLELRSGECQTVENNTDDPGILIIQLLIDNISRPAPNITHLLLKFDLDMPVERTVLQPKFYYSCMKVILDMLENLLKPDVNALLHEFGFQLLYELCVDPLTCEPTMDLLSNKKYHFFIKHLDAIGIAPLPKRNSNQPLRISSLHQRAWLLKLLAVELHAGDVSSSTHREACQTILSHLFGQDVLKIDGGQAMSPFSLQATYENAGIRTVSKSKVLELLEIIQFRCPNTSTKLSNIVAGMKYDLLAEDILGNPGNSGKGGVYYFSERNDRLIDLASFHDKLWQKYNSAYIQVSNLGSEVELNDVRETIQQLLRWAWKYNKNLEEQAAQLHMVTAWSQIVEVSASRRLTMLEGRSEILFQVLDASLSSCASPDCSLRMAFILSQVALTCMAKLRDERFLFPGSLNSDNITCLDLIVVKQLPNGACLTILFKLIMAILRNESSEALRRRQYALLLSYFQYCQNVVDPDVPTTVLQFLLHIEQDNEYIDLPKIDKDQAELARANFYTLRKEAQSVLDLVIKDATHGSEPGKTISLYVLDALICIDHERYFLNQLQSRGFLRSCFTAISSVLNQDGGLSLDSLQRACTFEAELGLLLRISHKYGKSGAQVLLSMGILEHLSSGRVINLQGGLRRVETRLRRDMAVDVDRQRMIVTPILRLVYSLTSLVDTSEFLEVKNKIVREVIDFVKGHQPLFDHVLRVDVVEADELSMEQINIVVGILSKIWPYEGSDEYGFVQGLFGMMRALFSRDLKVPSFAQSISPDNQRNSELQIFKLCFSLSSYLYFLVTKKSLRLQHSDASSSYSTSIELQQPTLTVLISLLASVTTALERAAEEKSLLLNKIRDINELSRQEVDEIINMCVQQDSVPSSDNIHKRRYIAMVEMCRVVASRDQLIILLLPLSEHVLNIVLIHLEESSVASDSTLTTKTITYGPKYDHKQDIASLCGKLIPTLERLELLSEEKVGHNLKVFHRLATSAKEIAIQKYAL* |
ORF Type | complete |
Blastp | Nuclear pore complex protein NUP205 from Arabidopsis with 65.33% of identity |
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Blastx | Nuclear pore complex protein NUP205 from Arabidopsis with 65.27% of identity |
Eggnog | nuclear pore complex protein(ENOG410XSBR) |
Kegg | Link to kegg annotations (AT5G51200) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417063.1) |
Pfam | Nuclear pore complex scaffold, nucleoporins 186/192/205 (PF11894.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer