Transcript | Ll_transcript_504953 |
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CDS coordinates | 148-4641 (+) |
Peptide sequence | MRNWLSEFATWAPDVNVVEYHGRAKGRAIIRQFEWHASDPGGLNKKTEAYKFNVLLTTYEMILADSSLLRGVPWEVLIVDEAHRLKNAQSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLASFEEKFNDLTTTQKVDELKKLVAPLMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQLLRNIGKGVAHKSMMNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILYREGHRVLIFSQMTKLLDILEDYLNGEFGPKTYERVDGSVSVTDRQAAITRFNQDKSRFVFLLSTRSCGLGINLASADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSDNQKEIEGILKWGTEELFNDSPGLNGKGTDETENSSKVEAVAEVEHKHRKRTGGLGDVYQDKCTESSSKILWDENAILKLLDRSNVQDGSADIAEVDCENDMLGSVKAVEWNDESTEEHGMGESPPDGTDDTCTQNSENKEDIIVVVNEENEWDRLLRMRWEKYQSEEEAALGRGKRQRKAISYREVCAAHPSETMSESGREEEKAPEPEPEREYTPAGRALKAKYAKLRARQKERLACRNAVGGSQPADGLPVTEPLPQTESNVKGGDLGAGPTHPVQEGPSINLMGSKHAQLSEARNGDASLFSRTDRLSKQKTSSHMDVSVNNPGRSLPDIFLPNHHYMGGLNSMNSMPTNNLSPVLGLCAPNAKQTEPSELSASKLSWRQNRHGARQEFPFSLAPCSGTSMDADVRSQKAAAKTKPSEASTSNIELSSRNSMHDNSFPFAPFPPALQGKEPNAFENFGARLATFHEKMPLPNLPFDEMLLARFPLTSKSMASSNLDLLPHLSLGGRFEALNGSMQDFPMPALPNFKVPPEDLFRHNQQERDVPPTLGLGQRPTTFSSFPENHRKVLENIMMRTGSGSGSSSLPKKSKPDGWSEDELDSLWIGVRRHGRGNWDVMLRDPKLKFSRNKTPESLSMRWEDEQIKVFQGPAFPVPRSSKMANEKSTKSAHLPISDGMMERALQGSRFVMPPKFQNHLTDMKLGIGDPATSMPPFLPLPSWAYEKNRAQFHENAAAETSDRPGTSSSVPTERPFLLDSFGTSRFGSLGVNYPGNLDIQRKEDEQANTKRGKMPLVLDESPNDMRDNCMNVGNGESTSSGLLSNLIRSDLLHSKGEEVAGSGSSKGKLPHWLREAVSLPSILPDPELPPTVSAIAQSVRMLYGDDKPTIPPFVIPGPPPSLPKDPRSSLKKIKRRSHKLNRVQPNFAGTSRDIRSSCHVDNGASSSNPLALLSQIQSDLNLPPLSLTKNAGSGLSPSPEVLQLVASCVASSPLHLPSTSGPSSILETKLPLPVGKAEFEDSEGAFITKQPRNMSPETRCPPQEHEVVDLDSGDSSKTQSDPSRADRPDEEVEVSSEGTVSDHAVGDQETQL* |
ORF Type | complete |
Blastp | Protein CHROMATIN REMODELING 4 from Arabidopsis with 57.53% of identity |
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Blastx | Protein CHROMATIN REMODELING 4 from Arabidopsis with 57.99% of identity |
Eggnog | helicase(COG0553) |
Kegg | Link to kegg annotations (AT5G44800) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447906.1) |
Pfam | SNF2 family N-terminal domain (PF00176.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer