Transcript | Ll_transcript_465249 |
---|---|
CDS coordinates | 314-7030 (+) |
Peptide sequence | MQSGGSGGGGGRNPGVGSAGRAASSPAAASPSSSSPASQLGLDSLHQQQLGSRQSFQQQLHRKPEGNESFLAYQAGVQGAYGSNSFPSSSGMHLPQQPRKFIDSAQHGSNQDAQLRGQGVEQQMRNPVNHAYLQYALQAQQKSATGIQSQQHSMMAMVNPSLLKGQEMGSGNLKMQDLMSMQAMNQAQGSSSSRNSSEHVGRGEKQIEQGQHIAHDQKSDGKPSNQGPAIGYLMPENMIKSMQAPETQQGIQNAMNTQIAMSAQLQAVQAWARERNIDLSHPANASLMAQLIPLMQSRMVPQPKANESNVGAQSSPAPVSKQQVNSPAVASESSAHANSSSDVSGQSGSSKARQTVPPSHFGSTTNPGIPSNSSDMVVQQFSVHGRESQTSLKQPVVFGNGIPSMHTQQSSSNVNLNADNPLNAKTSSSGPELPQMQHSRQLNQSAPQAGGQPNEGGSGKFARSQGSPAQMAQQRSGFTKKQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLEMQMRPPNHPSGGQIQDKSTGSIMAEQPRHVESNTKDSQSFRAVNGQSSLKQESFGRDEKSTMSSVHMQAVVQSASKESAPMLSAGKEQQKSMASSAKLDQDSEHGNNRTPVRNELALDRGKAVAPQPSVSDSIQTKKPAQASTVSQPKDVGSTGKYHGPLFDFPFFTRKHDSFGSSMMVNNNNNMSLAYDVKEILFEEGMEVLTKKRTENLKKIEGLLAINLERKRIRPDLVLRLQIEEKKLHLLDFQARLRDEIDQQQQEIMAMPDRPYRKFVRLCDRQRMELARQVQSSQRALREKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRDKRMEALKNNDVDRYREMLLEQQTSMPGDAAERYAVLSSFLSQTEEYLHKLGSKITAAKNQQEVEEAAKAAAAAARLQGLSEEEVRAAATCAGEEMMIRNHFMEINTPRDSSSVNKYYTLAHAVNETVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELYNWLPSVSCIYYVGTKDHRSRLFSQEVSAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFNDWFSKPFQKEAPTPNAEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLKCKMSAAQSAIYDWIKSTGTLRLDPEDEMCKVQKNPVYQMKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDRILVKLERTGHRVLLFSTMTKLLDILEEYLQWRRLVFRRIDGTTSLEDRESAIMDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDEMRSGGSVDMEDELAGKDRYIGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQENVHDVPSLQEVNRMIARSEEEVELFDQMDEELDWIEEMTRFDQVPKWLRANTREVNAAIAASSKRPSKNILSGSTVGVESSEVGTERRRGRPKGKKHLSYKEVEDDNGEYSEASSDERNVYAHEEGEVGEFEDEGYSGAEGAQPTVKDQLVDDPVCNAGYEFPRSSESAKKNQMIEEAGSSGSSSDSQRLRQAVSPSVSSQKFGSLSALDARPGSTSKRMADELEEGEIAVSGDSHMDHQQSESWIHDRDEGEDEQVLQMPKIKRKRSLRIRPRHTAERPEGKSTNEMTSHLAVQADHKYHAQLRTDPESTAFVDSNPSKHDQNPSSVKNKRTLPSRRVANTSKLHGSPKSSRLNSISAHSEDGGEHSRDIWEGKPINSSGSSAHGSKTAEVIQRKCKNVIGKLQRRIDKEGHQIVPLLTDLWKRVENSGYSGGSGNSLLDLRKIDQRIDRLEYSGAMELVFDVQFMLKSAMHFYSFSHEVRSEARKVHDLFFDILKIAFPDTDFQDARIALSFSAQVPAGTVTSPRPVAVGQSKRHRMVNEVETDPPYPPKKSLPRGSASSGENSRIKGHHHLPQKESRAGSSSREQPQQDDSPLLTHPGELVVCKKRRNDRDKSLVKPRTGPISPSRIGLAIRSPGSGSVPKDARLAQHNPHAPGWAGQSSQPGNGSGGGSVGWANPVKRLRSDPGKRRPSHM* |
ORF Type | complete |
Blastp | ATP-dependent helicase BRM from Arabidopsis with 63.56% of identity |
---|---|
Blastx | ATP-dependent helicase BRM from Arabidopsis with 63.51% of identity |
Eggnog | helicase(COG0553) |
Kegg | Link to kegg annotations (AT2G46020) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434058.1) |
Pfam | QLQ (PF08880.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer