Transcript | Ll_transcript_465262 |
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CDS coordinates | 3701-7369 (+) |
Peptide sequence | MLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELYNWLPSVSCIFYVGMKDQRSKLFSQEVSAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDKYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFNDWFSKPFQKECPTQNAEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLKCKMSAVQSAIYDWIKSTGTLRLDPEDEMCRVQKNPAYQMKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDRILVKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVFRRIDGTTSLEDRESAIVDFNSPDTDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRNGGSVDMDDELAGKDRYIGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQENVHDVPSLQEVNRMIARSEEEVELFDQMDEELDWIEEMTRFDQVPKWLRADTREVNAAIAASSKRPSKNILSGSTVGVETNEVGSERRRGRPKAKKHPSYKEVEDDNGEYSEASSEERNGYAHEEGEVAEFEDDGHSGADGAQPIYKGQLGDDLLCDAGYEFPRSSESAKNNHMVEEAGTSGSSSDSQRLAQILSPSVSSQKFGSLSALDARPSSASKRMSRELEEGEIAVSGDSQMDHQQSGSWIHDRDEGEDEQVLQKPKIKRKRSLRVRPRYATERSEEKSTNEMASHLAVQAHHKYQVQLRTDLESKSVVDSNPSKHDQNPSSVKNKRTFPLRRVANSSKLHTSSKSSRLNTISAHSEDGGEHSRERLEGKPINSSGSSAHGSKTAEVIQRKCKNVIGKLQRRIDKEGHQIVPLLTDLWKRVENSGYSGGSGNSLLDLRKIDQRIDRLEYSGATELVFDVQFMLKSAMHFYGFSHEIRSEARKVHDLFFDILKIAFPDTDFQDARIALSFSAQVPAGTVTSPRPVAVGQSKRHRMTNEAETDPPYPPHKSMPRGSASSSENTRIKVHAAQKESRPGSSAREQHQQDDSPKLTHPGELVKCKKRRNDRDKSIVKPRTGPVSPSLIGPTIRSPGSNSAPKDARLSQQNLHSQGWGGHLSQQANGSGGGSVGWANPVKRLRTDTGKRRPSHM* |
ORF Type | complete |
Blastp | ATP-dependent helicase BRM from Arabidopsis with 69.55% of identity |
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Blastx | ATP-dependent helicase BRM from Arabidopsis with 69.6% of identity |
Eggnog | helicase(COG0553) |
Kegg | Link to kegg annotations (AT2G46020) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432983.1) |
Pfam | SNF2 family N-terminal domain (PF00176.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer