Transcript | Ll_transcript_463556 |
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CDS coordinates | 285-6707 (+) |
Peptide sequence | MQMSKSPSSPEQQQSISSSPSQPREFNEATGMDDPESTMATVANFVEQLHTNLSSPLEKEFITECLLGIARKRKDARALIGSHAQALPLFINILRNGTPIAKVNVAATLSVLCKDEELRLKVLLGGCIPPLLSLLKYESTDARKAAAEAIYDVSSGGLLDDHVGMKIFVTEGVVPTLWNQLNPKNRQDKVVEGFITGALRNLCGDKDGYWKATLEAGGVDIIVGLLSSDNAVSQSNAASLLARLMLAFSDSIPKVIDSGAVKALLQLVGQENNISVRASAADALEALSSKSIKAKEVIVSADGLPILIGAIVAPSKECMQGDGGQALQEHATRALANICGGMSDLILYLGKLSYSPRLSAPLGDIIGALAYTLMVYEEKVDVDVKHLDATKIEDILVTLLKPRDNMLIQEHVLEAMASLYGNICLSKWLNQADSKKVLIGLITMAATDVQEYLILSLTSLCCGEVGIWEAIKKREGIQLLISLLGLSSEQHQEYAAQLLAILTNQVDDCKWAITAAGGIPPLVQLLETGSQRAREEAANILWSLCCHSEDIRACVESAGAIPAFLWLLKSGGPKGQEASAMALTKLVRVADSATINQLLALLLGDSPNSKAHIIRVLGHVLTMASAKDLLQKGSAANKGLRSLVQVLSSSNEETQEYAASVLADLFIVRQDICDSLTIDDVVLPCMKLLTSQTQVVATQSARALSALSRPTKNKSANKMSYIVEGDVEPLIKLAKTSSVDAAETAVAALANLLCDPLIAAEALAEDIVSALIRVLAKGTFEGKQNASRALHQLLKHFPVGEVLKGNAQCHFTVLALVDSLRDMDMDGTDAEDALDVIALLARTKQGVNFTYPPWSALAEIPSSFEPLIRCLSEGPPLVQDKAVEVLSRLCRDQPVILGDMLSASSRSIGSLATRIMSSSSLEVKVGSVALLICAAKEKKELSMDLLAASGFLKPLICSLVDMMKQSSSCSSLEIEAHAARGFMERNAFQEFDEFDIPDPATVLGSNAAMWLLSIIASFHVSNKLGIMEASGLEALSSKLARHTSNPQAEYEDTEGIWINALLLAILFQDADVVLSPATMRIIPSLALLLRSDEMIDKYFAAQAMASLVCNGNKGIDLAIANSGAVAGLIAIIGHIESDMPNLTGLSEEFSLVRSPDQVVLAHLFEIEDVRVGSTARKSIPLLVDLLRPIPERPSAPPVAIRLLISIANGSDTNKLILAEAGALEALNKYLSLSPQESTEAAISELLRILFCNSDIVKHEASTSSLNQLIAVLRLGSRNARYHAARALHELFDAESIRDSELAKQAIQPLVDMLNTTSGSEQEAALLALIKLTSGNYSKASLFTDVEGSPLESLYRILSSTDSSLELKSHATQLCFALFGNSKIRADPIAAECVEPLISLMHSDSETAIESGVYAFERLLEDEQQIELAAAYNVVDLLVSFVFGTNYPLVEATISALIKLGKDRTSSKLDMIRAGIIDNCLSLLQSAPSSLCSTISELFRILTNSNAIAMSSDAAEIVEPLFHVLLRRDFNLWGQHSALQALVNILEKPQSLATLKLTPSQVIEPLISFLGSPSQAIQQLGTELLSHLLAQEHFQQDITTTNAVVPLVHLAGIGILNLQQTAIKALEKISKSWPMAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNVLCSNADYYFKVPALVLVKMLLSTHDNTITIALNVLTVHERSDVTSAEQIMEAGAIDTLLELLRSHHCEEASARLLEALFNNVRVREMKVSKYAIAPLSQYLLDPQTRSQPGKLLAALALGNISQNEGHARYSESVSACRALISLLEDQSAEEMKMVAVCALQNFVMNSRTNRRAVAEAGGILVIQELLLSPNTEVAGQAALLIKFLFSTHTLQEYVSNELIRSLTGALGRELWSTATINEEVLKTLHVIFMNFPKLHISEAATLCIPHLVGALKSGGEVAQDSVLDTFFLLRQSWSTMPIDIAKSQAMVAAEAIPILQMLMKTCPPSFHERADALLHCLPGCLTVTIKRGNNLKQTMGSTNAFCRLTIGNGPPKQTKVVSHSTSPEWKEGFTWAFDVPPKGQKLHIICKSKNTFGKSTLGRVTIQIDKVVTEGVYSGLFSLNHDGNKDGSSRTLEIEIIWSNRISNDDI* |
ORF Type | complete |
Blastp | Protein CELLULOSE SYNTHASE INTERACTIVE 3 from Arabidopsis with 66.98% of identity |
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Blastx | Protein CELLULOSE SYNTHASE INTERACTIVE 3 from Arabidopsis with 67.49% of identity |
Eggnog | U-box domain-containing protein(ENOG410XRTN) |
Kegg | Link to kegg annotations (AT1G77460) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460552.1) |
Pfam | Armadillo/beta-catenin-like repeat (PF00514.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer