Transcript | Ll_transcript_462948 |
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CDS coordinates | 3-4898 (+) |
Peptide sequence | LLNVLHRAILSLKSSSDLSSLAFVEALLQFYLLHVVSTSTSRSDIRGSGMVPTILLLLEDYDPGHIHLVCFAVKILQKLMDCSSSAVSLLKELGGIELLAQRLQKEVHKVIGLVEETDNMMLTGESSRHSTDQLYSQKRLIKVSLKALGSASYAPANATRSQHSQDSSLPSTLVLIFGNVDKFGSDIYYSAVTVMSEIIHKDPTCFSVLHEMGLPDAFLSSIKSGILPSPKALTCIPNGLGAICLNAKGLEAVRESSSLRFLVDIFTRKKYVLVMNEAIVPLANSVEELLRHVSSLRSTGVDIIIEIIQKIASFGDGTGTDSKGKANGGSAMETDSEVKENDGHCGLVDTMANSSSEGITDDNFIQLCVFHLMVLVHRTMENSETCRLFVEKSGIEALLKLLLQPTIAQSSDGMSIALHSTMVFKGFAQHHSTPLARAFCSSLKEHLKKALAGFGAALEPLLLDPRMTSDNGIFSSLFLVEFLLFLAASKDNRWVTALLTELGNDSKDVLEDIGHVHREALWQIAVLENTKTEVEDGGACSSDSQQANLDASETEEQRFNSFRQFLDPLLRRRTPGWSIESQFFDLINLYRDLGRSTGSQRRSSSVGHLNLRSSSSNLSDHSGPDDNSGTTNKKESDKHRTYYKSCCDMIRSLSFHITHLFQELGKEMLLPSLLGDDIVSASPASKSVASTFASIFVDHMNFGAHINISGTETSISTKCRYFGKVIDFMDSILMERPDSCNPILLNYLYGRGVIQSVLTTFEATSQLLFAVNHAPASPVDTDDTNEKQDGKEDINNSWIYCSLASYGKLMDHLVTSSFILSSFTNHLLIEPLTNGDIPLPRDAETIVKVLQSTVLKTVLPVWTHPQFVDCSYEFISTVISIIRHIYSGVEVKNVNGSSGSRITGPPPNETTISTIVEMGFSRSRAEEALRQVGSNSVELAMEWLFSHPEEAPEDDELARALAMSLGNSESDKKDAVANDNDQQLEEEIVQLPPVEELLSTCTKLLLKEDLAFPVHNLLVMICSQDDGQYRSNVVTFIVDRIKECGLVSSNGNNIMLAALFHVLALLLNEDTVAREAVSKSGLINITSDLLYQWDSSLDSREKQQVPKWVTAAFLALDRLLQVDQKLNSEIAEQLKKEAVNIQKTSITIDEDRQNKLQSELGIHTKYADIYEQKRLVEVACSCMKNQLSSDTMHAVLLLCSNLTRNHSVALTFLDSGGLSLLLSLPTSSLFPGFDNVAASIVRHVLEDPQTLQQAMESEIKHSLVVASNRHPNGRVNPRNFLANLSSVIFRDPAIFMQAAQAVCQVEMVGERPYVVLLKDRDKDKTKEKEKENDKTLEKDTVQSDRKVGLGNTIIAASGNGHGKTHEPNAKSVKGHRKPTQTFTNVIELLLESICSFVPPLTDDIAPNNPAISASSDMDIDVSTVKGKGKAVATMSEGNETSSKEASASLAKIVFILKLLTEILLMYSASVHVLLRRDAEMSSTKSTHQKSNVGLSTSGIFYHILHNFLPYSRNLKKDKKVDGDWRQKLATRANQFIVAACVRSTEARRRVFTVISHIINEFVDSCNGVKPPGIEIQVFVDLLNDVLTARTPAGSSISAEASVTFMDAGLVMSFTRTVQVLDLDHADSSKVAT |
ORF Type | internal |
Blastp | E3 ubiquitin-protein ligase UPL2 from Arabidopsis with 33.27% of identity |
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Blastx | E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 33.12% of identity |
Eggnog | ubiquitin protein ligase(COG5021) |
Kegg | Link to kegg annotations (AT1G70320) |
CantataDB | Link to cantataDB annotations (CNT0001834) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455650.1) |
Pfam | Domain of Unknown Function (DUF913) (PF06025.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer