Transcript | Ll_transcript_480968 |
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CDS coordinates | 2-7852 (+) |
Peptide sequence | MTSLSETDLFVTIPKFSILDVRPNTKPEMRLMLGSSSDASKQTVTGKVPFPFNTGSFRRTSSEVKIDVDMPISTMFLMDYRWRMSSQSFVIRVQQPRVLVVPDFVIGVAEFFVPALGALTGREETMDPKNDPISRTSNVVLMESVYKQTEDVVHLSPSKQLVADCVGIDEYTYDACGKTICLSIETDARDVRSTRFRPIIVIGHGKRLRFMNVKIENGFLLRKYTYLSYDSSYSISTEDGVDIVLEDNLPSGDEKRLMNQTSGTSVYSQSESIGTQSFSFETQVVSSELTFYDGSKSFLDDSSYGEKLIRAKLDLSFMYASKEKDTWIRALVKDFTLEAGSGLIILDPVDISGGYTSVKGRTNISLLSTDICIHLSLSAVSLILNLQSQASSALSFGNATALVPCTNFDRIWVSGKGTSPDNITFWRPRAPANYVVLGDCVTSRSIPPSQAVMAVTNMYGRVRKPVGFHLIGSFLDIQGDVGGEEHSVDDSDCSLWMPIAPPGYTALGCVAHVGNQPPPNHIVHCLRSDLLTSTKCSDCLFNMPPNNQLTSGFSIWRLDNAIGSFLAHSSTGCPLNDKCYNLNHLLVWNSNRVPLIGSVSDFNSDPENNNQQTSKSVNTSGWDILKSISKATNCYMSTPNFERIWWDKGSDLRRPVSIWRPIARRGYAVVGDCITEGVEPPALGIIFKNDNPDISSKPVQFTKVSHIVGKGVEEVFFWYPIAPPGYVSLGCVVTRTDEAPHADLFCCPRMDLVSQASIHELPLSRSSSSRAPQCWSIWKVENQACTFLARSDLKKPSSRLAYIIGDYVKPKTRENINAELKLRFFSITILDSLCGMMRPLFDTTITNIKLATHGGLEGMNAVVISSIVASTFNAQLEAWEPLVEPFDAIFKFETYDNTAQAPLGLGKRVRISATSILNVNVSAANLESFVGSILSWRRQLELEQKASKLNTGVSGPKSKGDDATFSALDEDDLQTVILENKLGCDIFVKKVEHDVDIVDKLHHDDCTSVWIPPPRFSDRLNVADESREARYYIAVQMLEAKGLPVVDDGNSHNFFCALRLVIDSQASEQQKLFPQSARTKCVKPVVSRINGRDEGTVKWNELFIFEVPRKAPAKLEIEVTNLAAKAGKGDVVGSLSFSVGHGANVLRKVSSVRLFHQPCEFQNIRTFPLSRMVEQSNVGAMHNGRLFVSTSYFERNTIAKIQKDMENENVVDRDIGFWVGLSPEGKWETVRSLLPLSVVPKSLNNEYIGMEVVMKNGKKHVVFRSLVTVVNDSDVVLNIMPSHASHGTDPLLGANSTNTVVEEVFQNQCYSSSGWGNDWPAVHLDNPGHWSTRDFSYSSKDFFEPPLPPGWKWASGWSIDKFQYVDKEGWAYGPDLKNLKWPPTSSKFSTKSASDNVRRRRWICTRETISEEGIECLHSGASTVHPRASAVLSWRCTSKDSNQYLQVRPNFNSSQPSYSWGRAVAIGSSYIYSKDNLLDPGSRQNSVTHNCSLKLNELEKKDILLCCNPSSGSKQLWFSVSSDATVLNTALNVPVYDWKISINSPMKLENRLPCPAEFSILEKTKEGNCVERHHGVISSRQSVHIYSADIQKPVYLTLFVQGGWVMEKDSILVLDPSFSNRFSYFWMVHRQSRRKLRVSVEHDMGGTSAAQKTLRIFVPYWIVNDSSLALAYRVVEVEPSENAEIDSAHLSRAVKSAKTALKSPIISMDRRHSTSRRNLQVLEVIEDNSPLPSMLSPQDYAGRSGVTMFQSQKDTYLSPRVGISVSLRRSEVYSPGISLLELENKERIDVKAFNSDGSYYKLSALLNMTSDRTKVVHFQPHTMFVNRVGCSLCLQQCDSQSVVWVHPTDPPKPFEWQSSIRVELLKLRVDGYKWSTPFSVSYEGVMRINLKKDDGGDSMQLRVAVRSGAKRSRFEVIFRPNSLSSPYRIENRSILSPIHFRQVDGVGDSWQLLLPNSAASFLWEDLGRRRLLELFVDGTEPRQSLKYDIDEISDHEPVSSADGPTRALRVTIVKEEKINVVKISDWMPETEPAGVLGRRNLSSMSDNQKQQLMSITNSEFHINFDLAELGISVIDHTPEEILYMSVENLVLAYSTGLGSGISRFKLRMTGLQVDNQLPLTPMPVLFRPQKAVAETDYILKCSVTMQSNGSLDLCVYPYIGLHGPESSSAFLVNIHEPVIWRLHEMIQQVKLSRLYDSQITAASVDPIIQIGVLNMSEVRLRVSMAMSPSQRPRGVLGFWASLMTALGNTENMPVRINQRFHENITMRQSAMISMATSNIQKDLLGQPLQLLSGVDILGNASSALGHMSKGVAALSMDKKFIQSRQRQENKGVEDFGDVIREGGGAFAKGLFRGVTGILTKPLEGAKTSGVEGFVQGFGKGIIGVAAQPVSGVLDLLSKTTEGANAMRMKIASAITSDEQLLRRRLPRVISGDNLLRLYDDYKAQGQVILQLAESGSFFSQVDLFKVRGKFALTDAYEDHFMLPKGKVLIVTHGRVILLQQPSNIIAQRKFIPARDPCSILWDIMWDDLGTMELTHRKKDNPKGLPSQLILYLQSRSMDMKENVRIVKCTPESHQALEVYSSIEHALSTYGPGASKGILKNKVTKPYSPLAADGPSSG |
ORF Type | 3prime_partial |
Blastp | Vacuolar protein sorting-associated protein 13C from Mus with 34.63% of identity |
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Blastx | Vacuolar protein sorting-associated protein 13C from Mus with 34.63% of identity |
Eggnog | Vacuolar Protein(COG5043) |
Kegg | Link to kegg annotations (320528) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418850.1) |
Pfam | Vacuolar protein sorting-associated protein 62 (PF06101.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer