Protein coding transcript 126837

TranscriptLl_transcript_481772
CDS coordinates200-3991 (+)
Peptide sequenceMDSQQSNLFDTASQPDAANDAYTFLEFNTQGDDFDYPEFHDPIRSPVSWPTPSDSLAEPSERGGGGNGAGSDHQSDASPVSATPGSATKGRSGSSAGGNSQMVDALVPGMSELNFEDTGDDDNFEYGKGDFTEHACKYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASFEDLEKPGVDDEPQSVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNLTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQMLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGAKQAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQTSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGIAANDNFGSGATSDRRIGRGRGSYIPPGPTNGTHKPGVHSAGYTLPRAPLHPFHGGPQSQPYAIPSRRAVHGPVGAVPHVPSPGSRGFGAGRGNTGASIGNHLPHQQSTQQPVGNIGSTFNFPALENPNSQPSVGGPFSQPGFANNMPVQGASQSFRDQFSVPGMSQDFLGDDFKSQGSLVPYNVADFSTQASQSAYAVDYATQGAQGGFPGNFLNQNSQAGYPRFGSGNDFMSQDYMAHGSPDLFTQAGFSDHLQDDATQSHFSVANPNALQSQMNSLYSQPFAHYNTQPPNLQASQQQSQGQGSQNQKIHYNG*
ORF Typecomplete

Annotations of Ll_transcript_481772

BlastpRegulator of nonsense transcripts 1 homolog from Arabidopsis with 82% of identity
BlastxRegulator of nonsense transcripts 1 homolog from Arabidopsis with 82.48% of identity
EggnogHelicase(COG1112)
KeggLink to kegg annotations (AT5G47010)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019445009.1)
PfamRNA helicase (UPF2 interacting domain) (PF09416.9)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer