miRNA 127 details

Id Micro127
SequenceCTGCACTGCCTCTTCCCTGGC 
Annotated namesbdi-miR408-3p; cpa-miR408; dpr-miR408; osa-miR408-3p; rco-miR408; sbi-miR408; sof-miR408a; sof-miR408b; sof-miR408c; sof-miR408d; ssp-miR408a; ssp-miR408d; tae-miR408; zma-miR408a; zma-miR408b-3p; 
Annotated pre-miRNANone

Targets of miRNA 127

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_250441; FTRINITY_DN55971_c1_g1_i3 177 197 CCCAGGGAAGAGGCAGTGCAT BLAST psRNATarget
Ll_transcript_250440; FTRINITY_DN55971_c1_g1_i2 177 197 CCCAGGGAAGAGGCAGTGCAT BLAST psRNATarget
Ll_transcript_271093; FTRINITY_DN47508_c0_g1_i1 83 103 GTTTGGGAAGAGGCAGTGCAG BLAST psRNATarget
Ll_transcript_247378; FTRINITY_DN42138_c0_g1_i1 39 59 CCCTGGGAAGAGGTAGTGCAA BLAST psRNATarget
Ll_transcript_201067; FTRINITY_DN56456_c2_g2_i1 475 495 GTTAGGGAAGAGGCAGTGCTA BLAST psRNATarget
Ll_transcript_201077; FTRINITY_DN56456_c2_g2_i2 727 747 GTTAGGGAAGAGGCAGTGCTA BLAST psRNATarget
Ll_transcript_7997; FTRINITY_DN58513_c0_g1_i11 411 431 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_7991; FTRINITY_DN58513_c0_g1_i6 1244 1264 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_8005; FTRINITY_DN58513_c0_g1_i17 1451 1471 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_8014; FTRINITY_DN58513_c0_g1_i25 1948 1968 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_8002; FTRINITY_DN58513_c0_g1_i14 2133 2153 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_7995; FTRINITY_DN58513_c0_g1_i9 2149 2169 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_8004; FTRINITY_DN58513_c0_g1_i16 2340 2360 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_8007; FTRINITY_DN58513_c0_g1_i19 2356 2376 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_7998; FTRINITY_DN58513_c0_g1_i12 3106 3126 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_7987; FTRINITY_DN58513_c0_g1_i2 3298 3318 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_8013; FTRINITY_DN58513_c0_g1_i24 3354 3374 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_7994; FTRINITY_DN58513_c0_g1_i8 3036 3056 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_8008; FTRINITY_DN58513_c0_g1_i20 2986 3006 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_7986; FTRINITY_DN58513_c0_g1_i1 3036 3056 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_8010; FTRINITY_DN58513_c0_g1_i21 3106 3126 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_8015; FTRINITY_DN58513_c0_g1_i26 3156 3176 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_8003; FTRINITY_DN58513_c0_g1_i15 3106 3126 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_8016; FTRINITY_DN58513_c0_g1_i27 3156 3176 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_7996; FTRINITY_DN58513_c0_g1_i10 2986 3006 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_7988; FTRINITY_DN58513_c0_g1_i3 3036 3056 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_7992; FTRINITY_DN58513_c0_g1_i7 3106 3126 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_8011; FTRINITY_DN58513_c0_g1_i22 3156 3176 CTCAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_168254; FTRINITY_DN57341_c1_g1_i3 2664 2684 TAAAGGGGAGAGGGAGTGCAG BLAST psRNATarget
Ll_transcript_58733; FTRINITY_DN57831_c1_g1_i1 1313 1333 AACAGGGGAGTGGTGGTGCAG BLAST psRNATarget
Ll_transcript_58738; FTRINITY_DN57831_c1_g1_i5 1475 1495 AACAGGGGAGTGGTGGTGCAG BLAST psRNATarget
Ll_transcript_58739; FTRINITY_DN57831_c1_g1_i6 1313 1333 AACAGGGGAGTGGTGGTGCAG BLAST psRNATarget
Ll_transcript_58736; FTRINITY_DN57831_c1_g1_i4 1475 1495 AACAGGGGAGTGGTGGTGCAG BLAST psRNATarget
Ll_transcript_186976; FTRINITY_DN51819_c1_g3_i1 2625 2645 CTCAGGAAAGAGGTAGTGGAG BLAST psRNATarget
Ll_transcript_271072; FTRINITY_DN47519_c0_g1_i2 2227 2247 TGCAGGAAAAAGGCAGTGTAG BLAST psRNATarget
Ll_transcript_258451; FTRINITY_DN57943_c2_g5_i3 183 203 GGCAAGGTGGAGGTAGTGCAG BLAST psRNATarget
Ll_transcript_258448; FTRINITY_DN57943_c2_g5_i2 183 203 GGCAAGGTGGAGGTAGTGCAG BLAST psRNATarget
Ll_transcript_32477; FTRINITY_DN58402_c2_g1_i1 69 90 GCTATGGGAAGAGGCAGTGCAA BLAST psRNATarget
Ll_transcript_32479; FTRINITY_DN58402_c2_g1_i3 69 90 GCTATGGGAAGAGGCAGTGCAA BLAST psRNATarget
Ll_transcript_108440; FTRINITY_DN26018_c0_g1_i1 153 173 GCCAGTGAAGAGGCTGTGCAA BLAST psRNATarget
Ll_transcript_83862; FTRINITY_DN56688_c1_g1_i1 171 191 GTTAGGGAAGTGGCAGTGAAG BLAST psRNATarget
Ll_transcript_51787; FTRINITY_DN58855_c7_g1_i4 872 892 GTTAGAGAAGGGGTAGTGCAA BLAST psRNATarget
Ll_transcript_51785; FTRINITY_DN58855_c7_g1_i2 966 986 GTTAGAGAAGGGGTAGTGCAA BLAST psRNATarget
Ll_transcript_51783; FTRINITY_DN58855_c7_g1_i1 973 993 GTTAGAGAAGGGGTAGTGCAA BLAST psRNATarget
Ll_transcript_51786; FTRINITY_DN58855_c7_g1_i3 1067 1087 GTTAGAGAAGGGGTAGTGCAA BLAST psRNATarget
Ll_transcript_104563; FTRINITY_DN82352_c0_g1_i1 9 29 ACAAGGGAAGAAGCAGTGCAA BLAST psRNATarget
Ll_transcript_242021; FTRINITY_DN53068_c0_g2_i5 200 220 TCCAGTGAAGAGGCTGTGCAA BLAST psRNATarget
Ll_transcript_242018; FTRINITY_DN53068_c0_g2_i3 200 220 TCCAGTGAAGAGGCTGTGCAA BLAST psRNATarget
Ll_transcript_242020; FTRINITY_DN53068_c0_g2_i4 152 172 TCCAGTGAAGAGGCTGTGCAA BLAST psRNATarget
Ll_transcript_242013; FTRINITY_DN53068_c0_g1_i1 170 190 TCCAGTGAAGAGGCTGTGCAA BLAST psRNATarget
Ll_transcript_242014; FTRINITY_DN53068_c0_g2_i1 200 220 TCCAGTGAAGAGGCTGTGCAA BLAST psRNATarget
Ll_transcript_38120; FTRINITY_DN58923_c0_g4_i3 195 215 ACTATGGGAGAGGAAGTGCAG BLAST psRNATarget
Ll_transcript_33903; FTRINITY_DN58799_c0_g1_i16 901 921 GGCAGGGAAGAGCTGGTGCAA BLAST psRNATarget
Ll_transcript_33907; FTRINITY_DN58799_c0_g1_i19 1224 1244 GGCAGGGAAGAGCTGGTGCAA BLAST psRNATarget
Ll_transcript_31002; FTRINITY_DN58463_c0_g3_i2 3747 3767 CTAAGGGAAGAAGCAGTGCAT BLAST psRNATarget
Ll_transcript_94733; FTRINITY_DN54807_c1_g2_i1 710 730 AGCAGGGAGGAGGTTGTGCAT BLAST psRNATarget
Ll_transcript_94755; FTRINITY_DN54807_c1_g2_i10 716 736 AGCAGGGAGGAGGTTGTGCAT BLAST psRNATarget
Ll_transcript_231017; FTRINITY_DN52327_c2_g1_i8 321 341 GGTGGGGAAGAGGTAGGGTAG BLAST psRNATarget
Ll_transcript_94744; FTRINITY_DN54807_c1_g2_i7 833 853 AGCAGGGAGGAGGTTGTGCAT BLAST psRNATarget
Ll_transcript_231021; FTRINITY_DN52327_c2_g1_i11 321 341 GGTGGGGAAGAGGTAGGGTAG BLAST psRNATarget
Ll_transcript_231008; FTRINITY_DN52327_c2_g1_i1 349 369 GGTGGGGAAGAGGTAGGGTAG BLAST psRNATarget
Ll_transcript_231013; FTRINITY_DN52327_c2_g1_i6 349 369 GGTGGGGAAGAGGTAGGGTAG BLAST psRNATarget
Ll_transcript_231018; FTRINITY_DN52327_c2_g1_i9 321 341 GGTGGGGAAGAGGTAGGGTAG BLAST psRNATarget
Ll_transcript_231022; FTRINITY_DN52327_c2_g1_i12 321 341 GGTGGGGAAGAGGTAGGGTAG BLAST psRNATarget
Ll_transcript_231011; FTRINITY_DN52327_c2_g1_i4 395 415 GGTGGGGAAGAGGTAGGGTAG BLAST psRNATarget
Ll_transcript_231009; FTRINITY_DN52327_c2_g1_i2 349 369 GGTGGGGAAGAGGTAGGGTAG BLAST psRNATarget
Ll_transcript_231019; FTRINITY_DN52327_c2_g1_i10 395 415 GGTGGGGAAGAGGTAGGGTAG BLAST psRNATarget
Ll_transcript_231025; FTRINITY_DN52327_c2_g1_i14 321 341 GGTGGGGAAGAGGTAGGGTAG BLAST psRNATarget
Ll_transcript_231012; FTRINITY_DN52327_c2_g1_i5 321 341 GGTGGGGAAGAGGTAGGGTAG BLAST psRNATarget
Ll_transcript_148843; FTRINITY_DN57694_c1_g2_i5 2177 2197 GAAAGGGAGGGGGCAGGGCAG BLAST psRNATarget
Ll_transcript_85405; FTRINITY_DN56640_c4_g4_i2 789 809 ATGAAGGAAGAGGCAGTGAAG BLAST psRNATarget
Ll_transcript_337488; TRINITY_DN48563_c0_g1_i2 189 209 CCCAGGGAAGAGGCAGTGCAT BLAST psRNATarget
Ll_transcript_337486; TRINITY_DN48563_c0_g1_i1 189 209 CCCAGGGAAGAGGCAGTGCAT BLAST psRNATarget
Ll_transcript_395347; TRINITY_DN17129_c0_g1_i1 51 71 GTTTGGGAAGAGGCAGTGCAG BLAST psRNATarget
Ll_transcript_478796; TRINITY_DN35580_c0_g1_i1 35 55 CCCTGGGAAGAGGTAGTGCAA BLAST psRNATarget
Ll_transcript_426318; TRINITY_DN45537_c7_g2_i1 298 318 GTTAGGGAAGAGGCAGTGCTA BLAST psRNATarget
Ll_transcript_426320; TRINITY_DN45537_c7_g2_i2 564 584 GTTAGGGAAGAGGCAGTGCTA BLAST psRNATarget
Ll_transcript_426321; TRINITY_DN45537_c7_g2_i3 677 697 GTTAGGGAAGAGGCAGTGCTA BLAST psRNATarget
Ll_transcript_501062; TRINITY_DN47385_c2_g1_i3 2698 2718 TAAAGGGGAGAGGGAGTGCAG BLAST psRNATarget
Ll_transcript_501071; TRINITY_DN47385_c2_g1_i9 2701 2721 TAAAGGGGAGAGGGAGTGCAG BLAST psRNATarget
Ll_transcript_288452; TRINITY_DN51394_c0_g1_i8 1440 1460 AACAGGGGAGTGGTGGTGCAG BLAST psRNATarget
Ll_transcript_288454; TRINITY_DN51394_c0_g1_i10 1440 1460 AACAGGGGAGTGGTGGTGCAG BLAST psRNATarget
Ll_transcript_288448; TRINITY_DN51394_c0_g1_i5 1576 1596 AACAGGGGAGTGGTGGTGCAG BLAST psRNATarget
Ll_transcript_384058; TRINITY_DN47227_c1_g17_i1 2947 2967 CTCAGGAAAGAGGTAGTGGAG BLAST psRNATarget
Ll_transcript_309093; TRINITY_DN47191_c1_g1_i3 2222 2242 TGCAGGAAAAAGGCAGTGTAG BLAST psRNATarget
Ll_transcript_309096; TRINITY_DN47191_c1_g1_i4 2451 2471 TGCAGGAAAAAGGCAGTGTAG BLAST psRNATarget
Ll_transcript_309089; TRINITY_DN47191_c1_g1_i2 2474 2494 TGCAGGAAAAAGGCAGTGTAG BLAST psRNATarget
Ll_transcript_309088; TRINITY_DN47191_c1_g1_i1 2522 2542 TGCAGGAAAAAGGCAGTGTAG BLAST psRNATarget
Ll_transcript_296519; TRINITY_DN51715_c0_g1_i10 183 203 GGCAAGGTGGAGGTAGTGCAG BLAST psRNATarget
Ll_transcript_422951; TRINITY_DN47995_c1_g2_i6 76 96 GCCAGCGAAGAGGCAGTGCCA BLAST psRNATarget
Ll_transcript_422943; TRINITY_DN47995_c1_g2_i4 76 96 GCCAGCGAAGAGGCAGTGCCA BLAST psRNATarget
Ll_transcript_420374; TRINITY_DN48756_c2_g2_i2 54 75 GCTATGGGAAGAGGCAGTGCAA BLAST psRNATarget
Ll_transcript_420375; TRINITY_DN48756_c2_g1_i2 54 75 GCTATGGGAAGAGGCAGTGCAA BLAST psRNATarget
Ll_transcript_290586; TRINITY_DN49120_c0_g3_i1 122 142 GTTAGGGAAGTGGCAGTGAAG BLAST psRNATarget
Ll_transcript_525463; TRINITY_DN47525_c0_g1_i1 508 528 GTTAGAGAAGGGGTAGTGCAA BLAST psRNATarget
Ll_transcript_525466; TRINITY_DN47525_c0_g1_i4 936 956 GTTAGAGAAGGGGTAGTGCAA BLAST psRNATarget
Ll_transcript_525465; TRINITY_DN47525_c0_g1_i3 1030 1050 GTTAGAGAAGGGGTAGTGCAA BLAST psRNATarget
Ll_transcript_294413; TRINITY_DN53811_c0_g1_i1 118 138 GCCATTGAAGAGGCAGTTCAG BLAST psRNATarget
Ll_transcript_525464; TRINITY_DN47525_c0_g1_i2 835 855 GTTAGAGAAGGGGTAGTGCAA BLAST psRNATarget
Ll_transcript_310095; TRINITY_DN47181_c2_g2_i1 151 171 TCCAGTGAAGAGGCTGTGCAA BLAST psRNATarget
Ll_transcript_310096; TRINITY_DN47181_c2_g3_i1 245 265 TCCAGTGAAGAGGCTGTGCAA BLAST psRNATarget
Ll_transcript_517946; TRINITY_DN51270_c2_g1_i2 369 389 CTTAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_415365; TRINITY_DN49648_c1_g3_i6 64 84 ACTATGGGAGAGGAAGTGCAG BLAST psRNATarget
Ll_transcript_415374; TRINITY_DN49648_c1_g3_i7 64 84 ACTATGGGAGAGGAAGTGCAG BLAST psRNATarget
Ll_transcript_415376; TRINITY_DN49648_c1_g3_i8 64 84 ACTATGGGAGAGGAAGTGCAG BLAST psRNATarget
Ll_transcript_493971; TRINITY_DN52839_c3_g2_i1 147 167 GGTGGGGAAGAGGTAGGGTAG BLAST psRNATarget
Ll_transcript_415361; TRINITY_DN49648_c1_g3_i4 64 84 ACTATGGGAGAGGAAGTGCAG BLAST psRNATarget
Ll_transcript_350188; TRINITY_DN52412_c2_g1_i11 1157 1177 GGCAGGGAAGAGCTGGTGCAA BLAST psRNATarget
Ll_transcript_350195; TRINITY_DN52412_c2_g1_i16 1042 1062 GGCAGGGAAGAGCTGGTGCAA BLAST psRNATarget
Ll_transcript_350179; TRINITY_DN52412_c2_g1_i2 1157 1177 GGCAGGGAAGAGCTGGTGCAA BLAST psRNATarget
Ll_transcript_517950; TRINITY_DN51270_c2_g1_i5 3549 3569 CTTAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_517968; TRINITY_DN51270_c2_g1_i17 3282 3302 CTTAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_517960; TRINITY_DN51270_c2_g1_i12 3291 3311 CTTAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_485460; TRINITY_DN52328_c2_g1_i6 4334 4354 CTAAGGGAAGAAGCAGTGCAT BLAST psRNATarget
Ll_transcript_517955; TRINITY_DN51270_c2_g1_i8 3291 3311 CTTAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_517945; TRINITY_DN51270_c2_g1_i1 3291 3311 CTTAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_517956; TRINITY_DN51270_c2_g1_i9 3489 3509 CTTAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_517952; TRINITY_DN51270_c2_g1_i6 3291 3311 CTTAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_517949; TRINITY_DN51270_c2_g1_i4 3291 3311 CTTAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_517970; TRINITY_DN51270_c2_g1_i18 3291 3311 CTTAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_517954; TRINITY_DN51270_c2_g1_i7 3291 3311 CTTAGGGAAGAGGAAGAGCAG BLAST psRNATarget
Ll_transcript_509306; TRINITY_DN48136_c0_g2_i14 858 878 AGCAGGGAGGAGGTTGTGCAT BLAST psRNATarget
Ll_transcript_509291; TRINITY_DN48136_c0_g2_i7 2031 2051 AGCAGGGAGGAGGTTGTGCAT BLAST psRNATarget
Ll_transcript_488894; TRINITY_DN50311_c0_g1_i1 2184 2204 GAAAGGGAGGGGGCAGGGCAG BLAST psRNATarget
Ll_transcript_488898; TRINITY_DN50311_c0_g1_i3 2184 2204 GAAAGGGAGGGGGCAGGGCAG BLAST psRNATarget
Ll_transcript_329808; TRINITY_DN49094_c2_g3_i1 789 809 ATGAAGGAAGAGGCAGTGAAG BLAST psRNATarget
Ll_transcript_498764; TRINITY_DN50249_c1_g4_i1 47 67 AACATGGAAGAGGTAGTGTTG BLAST psRNATarget
Ll_transcript_498764; TRINITY_DN50249_c1_g4_i1 138 158 AACATGGAAGAGGTAGTGTTG BLAST psRNATarget
Ll_transcript_498764; TRINITY_DN50249_c1_g4_i1 177 197 AACATGGAAGAGGTAGTGTTG BLAST psRNATarget
Ll_transcript_344384; TRINITY_DN50455_c2_g8_i1 141 161 ATGAAGGAAGAGGCAGTGAAG BLAST psRNATarget
Ll_transcript_498769; TRINITY_DN50249_c1_g4_i4 47 67 AACATGGAAGAGGTAGTGTTG BLAST psRNATarget
Ll_transcript_502728; TRINITY_DN40168_c0_g1_i1 62 82 AATAGCGGTGAGGCAGTGCAG BLAST psRNATarget

Expression of miRNA 127


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)