Transcript | Ll_transcript_494011 |
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CDS coordinates | 1004-7648 (+) |
Peptide sequence | MVVEEFLHNVQVIFGNSSATQNIQASIISSILGSLESSVWRYDKSSLNLNPPLAYFPRFVEKALKLINDLKRQRHQVPLEWKDFGSQNDSLSCLFHMESVPLGKSYTSDELLKLIFPSSSQWIDNLLQLALFLYSEGLKLMPKMERSHSSSAKVTGTSDNESAICHEDEALFGDLFSETGRSVACTDGCEQPPAAALISNSSYHNMPIQAAIELLNFLKTCIFSPEWHPSLYVDGCNKLSSRHIDILLYLLNCQGCCSEDKSFSPHEDMKIGHIHELCYDLFYNLLMNHALSDSLEDYLVEKILIVENGAFCYDDRTLTLLAHTLFCRVGSTGSQLRTKIYRGYVSFVVDMVKSVCTKCPSFKDLVGTLPSLFHIEVVLIAFHLSDEAEKAVMVNLIFSTFKEVANLALDLNNTQLTCWALVVSRLILVLRHLIFHQQTCPTPLLLDVRSKLRIVPQSESSMPNKVNVHLSSWPSTALKNLMGALVGEEVVSSLTEQLIDFSGFPVSLGRDDLTIDGLTSEWEDIYLTFSLVLGLWRGKRASTVVDLIVERYFFTLCWDIPCVGSEEHQIISCSWDHPLDLCDMLHFSYFSHSLLGHQQLIGKFATCPDTVLSLLQHLSAMSMPEGIEEIGWDFLRSGMWLSLILSFTNTGILKYFMDNAISGQGLNWTDNYFGDQTYVELAGNMISSMIDSGQFPLLVRLFSSLLNKYVQIHQKAFLATISSRQNQASGFLPLLLLKHTRIDKFLQGELLERSSSNAGELESCLTLLSRFDSAVDKKASGILSRTSWECMYHGFPFHLSTPSATMFSCIVSIRGLIFALDGFLKINEAGGNVDMDVEVLREILDAVMNIKFDTIFENIHVKCDAIYHSLTAELEWSDYGNLIFVKQMESFLRDISAGGVSDGSILEWIICQVMEILSSLKKDPSKSVMLNLYLGLESVPVQIKKLFELHHSDCLFLIDSLDTCCSESVNIKVLGFFVDLLSGELFPDLKKKIQRKFLDKDSSCIAQWLERRILGTIVDSSSGVNCANGSSSSLRETTINFVLCLLSSPSEQQSKELQNHMFESALLALDTAFLLFDIHVARSYFNFIVQISRGKSLMKQLLTRTVMLMEKLVGNDNLLPGLKFLFVFIETVLNDCGSDITSSRRTTKKCSSGNAPGVVGHVAVQPVGSRKNIEKCTLSANQEGSDSLEWDAASVDEDDATSDGEVVSIDKDDEDANNERALASKVCTFTSSGNNYMEQHWYFCYTCDLTVSKGCCSVCAKVCHRGHRVVYSRSSQFFCDCGAGGVRGSNCQCLKPRKFTGSSTVPIDGTNIFKQCLTSSIDNPVRLSIPKEFQDGILLLLEELDIENRVLQLCSSLMPSITTRRASHHNNDKKISLGEDKVICHGVDLLQLKKAYKSGSIDLKIKVDYSNAKELKSHLASGNLVKSLLTVSIRGRLAIGEGDKVAIFDVGQLIGQATITPVTTDKTNMKPLSKNVVHFEIVQLAFNPVVDSYLVVAGYEDCQVLTLNPPGEVIDRLVLDLVLQGAYIRRVDWLPGSQVQLMVVTNRFVKIYDLSLDNISPIHCFTLPDGMIVDATLYPVPHGKMFLVILSENGNLFRLELSVNGNFGAIPLKEVIQFQGKEIHAKGSSLYFSSTYKLLFMSFQDGTTLIGQLTSDAASLVEFSSVYEEQDSKLWPAGLHHWTELLVGSGLFICLSSVKSNSPLAVSMGEHEMFAQSMRRSVGSTSPIVGVTVYKALSQDKIHCLVLHDDGSIQIYSSLSTASEKVKKLGSSILNKAYAITNPEFPLDFFEKTICITSDVKLGGDAIRNGDSEGAKQRLLNEDGFLESPIPTGFKISVINSNPDIVMVGFRIHVGNTSASHIPSSITTFQRVIKLDEGMRSWYDIPFTVAESLLADEEFTITVGPPFNGSSLPRVDSLEIYGRIKDEFGWKEKIDAVLDTEAGVLGSNLSHTGSGKKHRSMRSASIQEQVIADGLQLITKFYSSCRQFVCSSLEEARMNLGRLKCKQLLEAIFESDQEPVLQASACHVLQAVFSKREIYHQVKDMMRLLGVVKSSSLLLSRLGIGGTVGSWIIDEFTAQMRAVCKIASQRRSNFATFLETNGSEVLDSLMQVLWGILDFGKPDTQTMNSIVMSAVELIYCYAEYLASHGKDAGLHSVAPAVELLKKLLFSSNEAVQTASSLAISSILLQVPFPKQTMLATDDAVEGVVSIPAPAG |
ORF Type | 3prime_partial |
Blastp | Auxin transport protein BIG from Arabidopsis with 51.59% of identity |
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Blastx | Auxin transport protein BIG from Arabidopsis with 51.73% of identity |
Eggnog | Ubiquitin protein ligase E3 component n-recognin 4(ENOG410XPP8) |
Kegg | Link to kegg annotations (AT3G02260) |
CantataDB | Link to cantataDB annotations (CNT0002836) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452981.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer